RHTO_05635 (Rhodosporidium toruloides)
APSES

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04383 (KilA-N) IPR018004 RHTO_05635 T012290_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU07587
M01654_2.00 		Neurospora crassa
NNNDCRCGN
NCGYGHNNN		 PBM
Weirauch et al.(2014)
pTH9687 		0.749 0.623
estExt_fgenesh2_pg.C_10694_CONSTRUCT
M01102_2.00 		PBM CONSTRUCTS
NNACGCGW
WCGCGTNN		 PBM
Lambert et al.(2019)
pTH9838 		0.717 0.545
MBP1
M00003_2.00 		Saccharomyces cerevisiae
VACGCGWD
HWCGCGTB		 PBM
Badis et al.(2008)
MBP1_4486 		0.693 0.468
MBP1
M01514_2.00 		Saccharomyces cerevisiae
NNNNDCRCGH
DCGYGHNNNN		 PBM
Zhu et al.(2009)
Mbp1 		0.693 0.468
MBP1
M07434_2.00 		Saccharomyces cerevisiae
NDCGCGH
DCGCGHN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0329.1 		0.693 0.468
MBP1
M08472_2.00 		Saccharomyces cerevisiae
NDCGCGH
DCGCGHN		 Misc
DeBoer et al.(2011)
YDL056W_500 		0.693 0.468
NCU07246
M01653_2.00 		Neurospora crassa
NDCRCGN
NCGYGHN		 PBM
Weirauch et al.(2014)
pTH8957 		0.688 0.519
ANIA_03154
M01650_2.00 		Aspergillus nidulans
NNACGCG
CGCGTNN		 PBM
Weirauch et al.(2014)
pTH8232 		0.670 0.377
For this family, TFs with SR scores > 0.650 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EMS18705 APSES 39 117

Links

Other APSES family TFs
Other Rhodosporidium toruloides TFs

435 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANIA_01402 Aspergillus nidulans CADANIAG00001203 N
BDDG_08272 Blastomyces dermatitidis BDDG_08272 N
CGGC5_9554 Colletotrichum gloeosporioides CGGC5_9554 N
Cob_10954 Colletotrichum orbiculare Cob_10954 N
EV44_g2000 Erysiphe necator EV44_g2000 N
Z517_03846 Fonsecaea pedrosoi Z517_03846 N
MBM_05037 Marssonina brunnea MBM_05037 N
NFIA_016950 Neosartorya fischeri CADNFIAG00001487 N
PABG_06594 Paracoccidioides brasiliensis PABG_06594 N
PAAG_11083 Paracoccidioides sp lutzii PAAG_11083 N
PEX1_039750 Penicillium expansum PEX1_039750 N
PITC_099380 Penicillium italicum PITC_099380 N
U727_00431841361 Penicillium solitum U727_00431841361 N
GMDG_02644 Pseudogymnoascus destructans GMDG_02644 N
V499_03251 Pseudogymnoascus pannorum V499_03251 N
SAPIO_CDS10703 Scedosporium apiospermum SAPIO_CDS10703 N
SBOR_8201 Sclerotinia borealis SBOR_8201 N
SS1G_03805 Sclerotinia sclerotiorum SS1G_03805 N