TRIVIDRAFT_62398 (Trichoderma virens)
APSES

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04383 (KilA-N) IPR018004 TRIVIDRAFT_62398 T012394_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU07246
M01653_2.00 		Neurospora crassa
NDCRCGN
NCGYGHN		 PBM
Weirauch et al.(2014)
pTH8957 		0.839 0.827
ANIA_03154
M01650_2.00 		Aspergillus nidulans
NNACGCG
CGCGTNN		 PBM
Weirauch et al.(2014)
pTH8232 		0.789 0.560
estExt_fgenesh2_pg.C_10694_CONSTRUCT
M01102_2.00 		PBM CONSTRUCTS
NNACGCGW
WCGCGTNN		 PBM
Lambert et al.(2019)
pTH9838 		0.783 0.627
MBP1
M00003_2.00 		Saccharomyces cerevisiae
VACGCGWD
HWCGCGTB		 PBM
Badis et al.(2008)
MBP1_4486 		0.749 0.560
MBP1
M01514_2.00 		Saccharomyces cerevisiae
NNNNDCRCGH
DCGYGHNNNN		 PBM
Zhu et al.(2009)
Mbp1 		0.749 0.560
MBP1
M07434_2.00 		Saccharomyces cerevisiae
NDCGCGH
DCGCGHN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0329.1 		0.749 0.560
MBP1
M08472_2.00 		Saccharomyces cerevisiae
NDCGCGH
DCGCGHN		 Misc
DeBoer et al.(2011)
YDL056W_500 		0.749 0.560
NCU07587
M01654_2.00 		Neurospora crassa
NNNDCRCGN
NCGYGHNNN		 PBM
Weirauch et al.(2014)
pTH9687 		0.687 0.493
For this family, TFs with SR scores > 0.650 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EHK25731 APSES 27 104

Links

Other APSES family TFs
Other Trichoderma virens TFs

420 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000010579 Ailuropoda melanoleuca ENSAMEG00000010579 N
ZNF683 Callithrix jacchus ENSCJAG00000009793 N
ZNF683 Canis familiaris ENSCAFG00000012496 N
zf(c2h2)-46 Ciona intestinalis ENSCING00000004641 N
ENSCSAVG00000011146 Ciona savignyi ENSCSAVG00000011146 N
ZNF683 Echinops telfairi ENSETEG00000004329 N
ENSSTOG00000016074 Ictidomys tridecemlineatus ENSSTOG00000016074 N
Zfp683 Mus musculus ENSMUSG00000049410 N
ENSNLEG00000009200 Nomascus leucogenys ENSNLEG00000009200 N
SNAPOd2T00011227001 Oikopleura dioica SNAPOd2T00011227001 N
ZNF683 Tupaia belangeri ENSTBEG00000011435 N