estExt_Genewise1.C_120474 (Mycosphaerella fijiensis)
APSES

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04383 (KilA-N) IPR018004 estExt_Genewise1.C_120474 T013917_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
e_gw1.5.76.1
M01652_2.00 		Nectria haematococca
NNVTGCABNN
NNVTGCABNN		 PBM
Weirauch et al.(2014)
pTH9267 		0.845 0.940
HCAG_07413
M01651_2.00 		Histoplasma capsulatum
NNNHRYDNNN
NNNHRYDNNN		 PBM
Weirauch et al.(2014)
pTH9346 		0.820 0.916
stuA
M01649_2.00 		Aspergillus nidulans
NNTGCAKNNN
NNNMTGCANN		 PBM
Weirauch et al.(2014)
pTH9236 		0.706 0.867
stuA
M09761_2.00 		Aspergillus nidulans
DBDCGCGWWB
VWWCGCGHVH		 Transfac
Matys et al.(2006)
F$STUAP_01 		0.706 0.867
For this family, TFs with SR scores > 0.650 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_Genewise1.C_120474 APSES 128 215

Links

Other APSES family TFs
Other Mycosphaerella fijiensis TFs

149 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_07373 Aegilops tauschii F775_07373 N
AMTR_s00043p00136400 Amborella trichopoda AMTR_s00043p00136400 N
Aquca_005_00404 Aquilegia coerulea Aquca_005_00404 N
BRADI1G25370 Brachypodium distachyon BRADI1G25370 N
PK07026.1 Cannabis sativa PK07026.1 N
Ca_06943 Cicer arietinum Ca_06943 N
Ciclev10007843m.g Citrus clementina Ciclev10007843m.g N
Cucsa.053270 Cucumis sativus Cucsa.053270 N
Eucgr.F03414 Eucalyptus grandis Eucgr.F03414 N
gene03285-v1.0-hybrid Fragaria vesca gene03285-v1.0-hybrid N
GLYMA13G36120 Glycine max GLYMA13G36120 N
GLYMA12G16750 Glycine max GLYMA12G16750 N
GLYMA06G41500 Glycine max GLYMA06G41500 N
GLYMA12G34420 Glycine max GLYMA12G34420 N
Gorai.002G080600 Gossypium raimondii Gorai.002G080600 N
Gorai.009G427800 Gossypium raimondii Gorai.009G427800 N
Gorai.013G164700 Gossypium raimondii Gorai.013G164700 N
MLOC_37712 Hordeum vulgare MLOC_37712 N
LPERR07G15240 Leersia perrieri LPERR07G15240 N
Lus10035840.g Linum usitatissimum Lus10035840.g N
Lus10036623.g Linum usitatissimum Lus10036623.g N
MDP0000205622 Malus domestica MDP0000205622 N
cassava24578.valid.m1 Manihot esculenta cassava24578.valid.m1 N
MTR_2g082090 Medicago truncatula MTR_2g082090 N
mgf007614m Mimulus guttatus mgf007614m N
GSMUA_Achr6G24310_001 Musa acuminata GSMUA_Achr6G24310_001 N
OBART07G17780 Oryza barthii OBART07G17780 N
OB07G23640 Oryza brachyantha OB07G23640 N
ORGLA07G0142600 Oryza glaberrima ORGLA07G0142600 N
OGLUM07G17420 Oryza glumaepatula OGLUM07G17420 N
BGIOSGA025902 Oryza indica BGIOSGA025902 N
OLONG_024541 Oryza longistaminata OLONG_024541 N
OMERI07G14660 Oryza meridionalis OMERI07G14660 N
ONIVA07G16090 Oryza nivara ONIVA07G16090 N
OPUNC07G16570 Oryza punctata OPUNC07G16570 N
ORUFI07G18480 Oryza rufipogon ORUFI07G18480 N
CIGR1 Oryza sativa OS07G0545800 N
Pavir.J35699 Panicum virgatum Pavir.J35699 N
Pavir.Bb02923 Panicum virgatum Pavir.Bb02923 N
POPTR_0001s44090 Populus trichocarpa POPTR_0001s44090 N
POPTR_0011s13460 Populus trichocarpa POPTR_0011s13460 N
Pm029452 Prunus mume Pm029452 N
PRUPE_ppa003323mg Prunus persica PRUPE_ppa003323mg N
SapurV1A.0327s0070 Salix purpurea SapurV1A.0327s0070 N
SapurV1A.3085s0020 Salix purpurea SapurV1A.3085s0020 N
Si029156m.g Setaria italica Si029156m.g N
Solyc07g063940.1 Solanum lycopersicum Solyc07g063940.1 N
Solyc12g005340.1 Solanum lycopersicum Solyc12g005340.1 N
PGSC0003DMG400021802 Solanum tuberosum PGSC0003DMG400021802 N
PGSC0003DMG400019232 Solanum tuberosum PGSC0003DMG400019232 N
TCM_031132 Theobroma cacao TCM_031132 N
Traes_2AS_620B821281 Triticum aestivum Traes_2AS_620B821281 N
Traes_2DS_2D035BAFD Triticum aestivum Traes_2DS_2D035BAFD N
Traes_2BS_4600D4B54 Triticum aestivum Traes_2BS_4600D4B54 N
TRIUR3_35245 Triticum urartu TRIUR3_35245 N
VIT_19s0014g04940 Vitis vinifera VIT_19s0014g04940 N
GRMZM5G821439 Zea mays GRMZM5G821439 N