SPU_025601 (Strongylocentrotus purpuratus)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01388 (ARID) IPR001606 SPU_025601 T015665_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARID3A
M01658_2.00 		Microcebus murinus
NDATHAWDN
NHWTDATHN		 PBM
Weirauch et al.(2014)
pTH9214 		0.739 0.907
Arid3a
M00115_2.00 		Mus musculus
NDATHADDN
NHHTDATHN		 PBM
Badis et al.(2009)
Arid3a_3875 		0.739 0.907
Arid3a
M01660_2.00 		Mus musculus
NDATHAADN
NHTTDATHN		 PBM
Weirauch et al.(2014)
pTH5169 		0.739 0.907
Arid3a
M02651_2.00 		Mus musculus
ATYAAA
TTTRAT		 SELEX
Mathelier et al.(2014)
MA0151.1 		0.739 0.907
ARID3A
M09766_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DRI1_01 		0.739 0.907
ARID3A
M01662_2.00 		Procavia capensis
NNATHDNNN
NNNHDATNN		 PBM
Weirauch et al.(2014)
pTH9384 		0.739 0.895
Arid3b
M01659_2.00 		Mus musculus
NNDATTAAWWN
NWWTTAATHNN		 PBM
Weirauch et al.(2014)
pTH4425 		0.709 0.849
cfi-1
M01667_2.00 		Caenorhabditis elegans
NNATHDNN
NNHDATNN		 PBM
Weirauch et al.(2014)
pTH5118 		0.701 0.791
retn
M01664_2.00 		Drosophila melanogaster
NDATHRNN
NNYDATHN		 PBM
Weirauch et al.(2014)
pTH5119 		0.687 0.860
retn
M03590_2.00 		Drosophila melanogaster
NNATTRATHN
NDATYAATNN		 SELEX
Nitta et al.(2015)
retn_1 		0.687 0.860
retn
M05899_2.00 		Drosophila melanogaster
AATYAAAM
KTTTRATT		 B1H
Zhu et al.(2011)
retn_SANGER_5_FBgn0004795 		0.687 0.860
retn
M09768_2.00 		Drosophila melanogaster
NNRATTAADN
NHTTAATYNN		 Transfac
Matys et al.(2006)
I$DRI_01 		0.687 0.860
DDB_G0275333
M01656_2.00 		Dictyostelium discoideum
NNATHDNNNN
NNNNHDATNN		 PBM
Weirauch et al.(2014)
pTH5168 		0.675 0.488
ACYPI009013
M01655_2.00 		Acyrthosiphon pisum
NDATHAADN
NHTTDATHN		 PBM
Weirauch et al.(2014)
pTH5117 		0.664 0.709
GSPATT00004674001
M01665_2.00 		Paramecium tetraurelia
NNATYHNN
NNDRATNN		 PBM
Weirauch et al.(2014)
pTH5124 		0.508 0.372
TTHERM_00243900
M01666_2.00 		Tetrahymena thermophila
NDDATYANN
NNTRATHHN		 PBM
Weirauch et al.(2014)
pTH5128 		0.508 0.372
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SPU_025601-tr ARID/BRIGHT 204 290

Links

Other ARID/BRIGHT family TFs
Other Strongylocentrotus purpuratus TFs

367 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000015146 Ailuropoda melanoleuca ENSAMEG00000015146 N
ENSBTAP00000012908-D1 Bos grunniens ENSBTAP00000012908-D1 N
ENSBTAG00000026286 Bos taurus ENSBTAG00000026286 N
ENSCAFG00000011367 Canis familiaris ENSCAFG00000011367 N
ENSCPOG00000022638 Cavia porcellus ENSCPOG00000022638 N
ENSCSAG00000018260 Chlorocebus sabaeus ENSCSAG00000018260 N
ENSDNOG00000043641 Dasypus novemcinctus ENSDNOG00000043641 N
ENSDNOG00000046682 Dasypus novemcinctus ENSDNOG00000046682 N
ENSECAG00000021592 Equus caballus ENSECAG00000021592 N
GTF2IRD2B Homo sapiens ENSG00000174428 N
GTF2IRD2 Homo sapiens ENSG00000196275 N
ENSLAFG00000013081 Loxodonta africana ENSLAFG00000013081 N
ENSP00000393677 Macaca fascicularis ENSP00000393677 N
ENSMPUG00000016180 Mustela putorius furo ENSMPUG00000016180 N
Gtf2ird2 Mus musculus ENSMUSG00000015942 N
Myotis_brandtii_GTF2IRD2_10014292 Myotis brandtii Myotis_brandtii_GTF2IRD2_10014292 N
ENSMLUG00000024497 Myotis lucifugus ENSMLUG00000024497 N
ENSOCUG00000022131 Oryctolagus cuniculus ENSOCUG00000022131 N
ENSOGAG00000000844 Otolemur garnettii ENSOGAG00000000844 N
ENSOARG00000010976 Ovis aries ENSOARG00000010976 N
ENSPTRG00000019295 Pan troglodytes ENSPTRG00000019295 N
ENSPANG00000018076 Papio anubis ENSPANG00000018076 N
ENSPPYG00000017480 Pongo abelii ENSPPYG00000017480 N
ENSPVAG00000005368 Pteropus vampyrus ENSPVAG00000005368 N
ENSSSCG00000028635 Sus scrofa ENSSSCG00000028635 N
gtf2i Xenopus tropicalis XB-GENE-1217437 N