Ciclev10001099m.g (Citrus clementina)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01388 (ARID) IPR001606 Ciclev10001099m.g T016078_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARID3
M06695_2.00 		Arabidopsis thaliana
AAWWHNAAATYAAWW
WWTTRATTTNDWWTT		 Dap-seq
OMalley et al.(2016)
AT2G17410_col_a 		0.681 0.812
ARID6
M06694_2.00 		Arabidopsis thaliana
HAATTRAWTTN
NAAWTYAATTD		 Dap-seq
OMalley et al.(2016)
AT1G20910_col_a 		0.672 0.800
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10001099m ARID/BRIGHT 149 234
Ciclev10001169m ARID/BRIGHT 149 234
Ciclev10001171m ARID/BRIGHT 149 234
Ciclev10001175m ARID/BRIGHT 149 234

Links

Other ARID/BRIGHT family TFs
Other Citrus clementina TFs

154 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACRE_009170 Acremonium chrysogenum ACRE_009170 I
ARB_01185 Arthroderma benhamiae ARB_01185 N
MCYG_03418 Arthroderma otae MCYG_03418 N
fgenesh1_pm.00168_#_210 Aspergillus carbonarius fgenesh1_pm.00168_#_210 N
ACLA_037430 Aspergillus clavatus CADACLAG00003256 N
CADAFLAG00001296 Aspergillus flavus CADAFLAG00001296 N
AFUA_3G09670 Aspergillus fumigatus CADAFUAG00004963 N
ANIA_03075 Aspergillus nidulans CADANIAG00010003 N
CADANGAG00012801 Aspergillus niger CADANGAG00012801 N
CADAORAG00003168 Aspergillus oryzae CADAORAG00003168 N
ATEG_04481 Aspergillus terreus CADATEAG00009053 N
BAUCODRAFT_70890 Baudoinia compniacensis BAUCODRAFT_70890 I
BBA_00740 Beauveria bassiana BBA_00740 I
BDDG_03436 Blastomyces dermatitidis BDDG_03436 N
Bcin02g05460 Botrytis cinerea Bcin02g05460 I
PVAR5_5474 Byssochlamys spectabilis PVAR5_5474 N
PV04_04067 Capronia semiimmersa PV04_04067 N
CHGG_09596 Chaetomium globosum CHGG_09596 I
CIMG_01913 Coccidioides immitis CIMG_01913 N
CPC735_046040 Coccidioides posadasii CPC735_046040 N
CFIO01_08325 Colletotrichum fioriniae CFIO01_08325 I
CGGC5_10678 Colletotrichum gloeosporioides CGGC5_10678 I
GLRG_09279 Colletotrichum graminicola GLRG_09279 I
CH063_10224 Colletotrichum higginsianum CH063_10224 I
Cob_01903 Colletotrichum orbiculare Cob_01903 I
CSUB01_08919 Colletotrichum sublineola CSUB01_08919 I
W97_03128 Coniosporium apollinis W97_03128 N
CCM_05966 Cordyceps militaris CCM_05966 I
e_gw1.8.145.1 Cryphonectria parasitica e_gw1.8.145.1 I
DOTSEDRAFT_54819 Dothistroma septosporum DOTSEDRAFT_54819 I
FFUJ_08392 Fusarium fujikuroi FFUJ_08392 I
FGRRES_17514 Fusarium graminearum FGRRES_17514 I
FPSE_08858 Fusarium pseudograminearum FPSE_08858 I
NechaG93341 Fusarium solani NechaG93341 I
GGTG_02446 Gaeumannomyces graminis GGTG_02446 I
M7I_1858 Glarea lozoyensis M7I_1858 I
CMQ_3768 Grosmannia clavigera CMQ_3768 I
HCBG_02521 Histoplasma capsulatum HCBG_02521 N
MPH_00135 Macrophomina phaseolina MPH_00135 N
MAPG_09501 Magnaporthe poae MAPG_09501 I
MBM_07119 Marssonina brunnea MBM_07119 N
MANI_011716 Metarhizium anisopliae MANI_011716 I
MBR_04909 Metarhizium brunneum MBR_04909 I
MGU_01761 Metarhizium guizhouense MGU_01761 I
MCYG_03418 Microsporum canis MCYG_03418 N
MGYG_00581 Microsporum gypseum MGYG_00581 N
MYCTH_2308823 Myceliophthora thermophila MYCTH_2308823 I
estExt_Genewise1Plus.C_13865 Mycosphaerella fijiensis estExt_Genewise1Plus.C_13865 I
estExt_fgenesh1_pg.C_chr_60424 Mycosphaerella graminicola estExt_fgenesh1_pg.C_chr_60424 I
fgenesh1_pm.sca_12_chr5_2_0000158 Nectria haematococca fgenesh1_pm.sca_12_chr5_2_0000158 I
UCRNP2_2614 Neofusicoccum parvum UCRNP2_2614 N
NFIA_067630 Neosartorya fischeri CADNFIAG00006385 N
NCU02307 Neurospora crassa NCU02307 D
estExt_Genewise1Plus.C_90712 Neurospora discreta estExt_Genewise1Plus.C_90712 I
NEUTE1DRAFT_124026 Neurospora tetrasperma NEUTE1DRAFT_124026 I
OCS_02179 Ophiocordyceps sinensis OCS_02179 I
F503_03706 Ophiostoma piceae uamh F503_03706 I
Pc12g15860 Penicillium chrysogenum Pc12g15860 N
PDIP_76170 Penicillium digitatum PDIP_76170 N
PEX1_096620 Penicillium expansum PEX1_096620 N
PITC_015280 Penicillium italicum PITC_015280 N
PMAA_045840 Penicillium marneffei PMAA_045840 N
PDE_04982 Penicillium oxalicum PDE_04982 N
PCH_Pc12g15860 Penicillium rubens PCH_Pc12g15860 N
U727_00431251121 Penicillium solitum U727_00431251121 N
PFICI_14476 Pestalotiopsis fici PFICI_14476 I
PODANS_5_9700 Podospora anserina PODANS_5_9700 I
MYCFIDRAFT_204155 Pseudocercospora fijiensis MYCFIDRAFT_204155 I
GMDG_05510 Pseudogymnoascus destructans GMDG_05510 I
GMDG_06850 Pseudogymnoascus destructans GMDG_06850 I
SAPIO_CDS3835 Scedosporium apiospermum SAPIO_CDS3835 I
SBOR_8128 Sclerotinia borealis SBOR_8128 I
SMAC_09353 Sordaria macrospora SMAC_09353 I
HMPREF1624_04642 Sporothrix schenckii HMPREF1624_04642 I
S40288_04125 Stachybotrys chartarum S40288_04125 I
S40285_04496 Stachybotrys chlorohalonata S40285_04496 I
PMAA_045840 Talaromyces marneffei PMAA_045840 N
TSTA_035080 Talaromyces stipitatus TSTA_035080 N
THITE_2050890 Thielavia terrestris THITE_2050890 I
UCRPA7_5598 Togninia minima UCRPA7_5598 I
VHEMI08584 Torrubiella hemipterigena VHEMI08584 I
TRIATDRAFT_37495 Trichoderma atroviride TRIATDRAFT_37495 I
TRIREDRAFT_51907 Trichoderma reesei TRIREDRAFT_51907 I
TRIVIDRAFT_114564 Trichoderma virens TRIVIDRAFT_114564 I
TEQG_00925 Trichophyton equinum TEQG_00925 N
H101_05235 Trichophyton interdigitale H101_05235 N
H102_08372 Trichophyton rubrum H102_08372 N
H105_08399 Trichophyton soudanense H105_08399 N
TESG_06256 Trichophyton tonsurans TESG_06256 N
TRV_03240 Trichophyton verrucosum TRV_03240 N
GSTUM_00003233001 Tuber melanosporum GSTUM_00003233001 N
GSTUM_00008124001 Tuber melanosporum GSTUM_00008124001 N
UREG_06856 Uncinocarpus reesii UREG_06856 N
UV8b_6210 Ustilaginoidea virens UV8b_6210 I
VDAG_09925 Verticillium dahliae VDAG_09925 I
Mycgr3G109947 Zymoseptoria tritici Mycgr3G109947 I