CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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evm.TU.supercontig_214.10
(
Carica papaya
)
ARID/BRIGHT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01388 (ARID)
IPR001606
evm.TU.supercontig_214.10
T016104_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_214.10
ARID/BRIGHT
38
133
VDNSKEARLRRLFDQVLSVSLKEVAGRGCIRPLPIMLGDGRVVDLLELLLVVTERGGSDLVSRDGLWGFVSKELGLDRRVWPSVKLIYVKYLDKLE
Links
Other
ARID/BRIGHT
family TFs
Other
Carica papaya
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.Fa00090
Panicum virgatum
Pavir.Fa00090
N
0.000
Pavir.Fb02374
Panicum virgatum
Pavir.Fb02374
N
0.000
Si015823m.g
Setaria italica
Si015823m.g
N
0.000
Sb07g025270
Sorghum bicolor
Sb07g025270
N
0.000
GRMZM2G175280
Zea mays
GRMZM2G175280
N
0.000