CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NCU03892
(
Neurospora crassa
)
ARID/BRIGHT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01388 (ARID)
IPR001606
NCU03892
T016222_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU03892
M01670_2.00
Neurospora crassa
HAAATTTD
HAAATTTD
PBM
Weirauch et al.(2014)
pTH8975
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.422
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M01670_2.00
ARID/BRIGHT
19
107
EYEKFIEDLRVFHEKRGTNFDPEPKMGNLTVDLLKLFKHIVEHGGYDKVSDEKLMWRKMCEGLGLMRHNAPADAYTLKQIFYKNLAAYE
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NCU03892
ARID/BRIGHT
19
107
EYEKFIEDLRVFHEKRGTNFDPEPKMGNLTVDLLKLFKHIVEHGGYDKVSDEKLMWRKMCEGLGLMRHNAPADAYTLKQIFYKNLAAYE
Links
Other
ARID/BRIGHT
family TFs
Other
Neurospora crassa
TFs
18 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CHGG_09197
Chaetomium globosum
CHGG_09197
I
0.785
CTHT_0044130
Chaetomium thermophilum
CTHT_0044130
I
0.785
FFUJ_04361
Fusarium fujikuroi
FFUJ_04361
I
0.425
FOXG_06191
Fusarium oxysporum
FOXG_06191
I
0.425
FVEG_04045
Fusarium verticillioides
FVEG_04045
I
0.425
CMQ_6414
Grosmannia clavigera
CMQ_6414
I
0.553
MYCTH_2306410
Myceliophthora thermophila
MYCTH_2306410
I
0.785
estExt_fgenesh3_pm.C_60533
Neurospora discreta
estExt_fgenesh3_pm.C_60533
I
0.785
NEUTE1DRAFT_124821
Neurospora tetrasperma
NEUTE1DRAFT_124821
I
0.785
F503_08290
Ophiostoma piceae uamh
F503_08290
I
0.562
PODANS_4_7020
Podospora anserina
PODANS_4_7020
I
0.714
SMAC_06319
Sordaria macrospora
SMAC_06319
I
0.785
SPBR_06453
Sporothrix brasiliensis
SPBR_06453
I
0.553
HMPREF1624_00227
Sporothrix schenckii
HMPREF1624_00227
I
0.553
THITE_135489
Thielavia terrestris
THITE_135489
I
0.785
VDBG_07957
Verticillium albo atrum
VDBG_07957
I
0.476
VDBG_07957
Verticillium alfalfae
VDBG_07957
I
0.476
VDAG_05527
Verticillium dahliae
VDAG_05527
I
0.476