XP_002159148.1 (Hydra magnipapillata)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01388 (ARID) IPR001606 XP_002159148.1 T016334_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
e_gw.4.260.1_CONSTRUCT
M01668_2.00 		PBM CONSTRUCTS
NNNDATHNNN
NNNDATHNNN		 PBM
Weirauch et al.(2014)
pTH5122 		0.443 0.477
arid6
M01657_2.00 		Danio rerio
NNRWATYN
NRATWYNN		 PBM
Weirauch et al.(2014)
pTH5120 		0.425 0.430
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
XP_002159148.1 ARID/BRIGHT 267 353

Links

Other ARID/BRIGHT family TFs
Other Hydra magnipapillata TFs

14 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nAv.1.0.1.g05527 Acanthocheilonema viteae nAv.1.0.1.g05527 N 0.000
AQUA011533 Anopheles quadriannulatus AQUA011533 I 0.000
ASU_12051 Ascaris suum ASU_12051 N 0.000
Bm4897 Brugia malayi Bm4897 N 0.000
BTMF_0000429201 Brugia timori BTMF_0000429201 I 0.000
CGOC_0000554601 Cylicostephanus goldi CGOC_0000554601 N 0.000
DICVIV_03671 Dictyocaulus viviparus DICVIV_03671 N 0.000
nDi.2.2.2.g05496 Dirofilaria immitis nDi.2.2.2.g05496 N 0.000
DME_0000880101 Dracunculus medinensis DME_0000880101 N 0.000
EEL_0000947001 Elaeophora elaphi EEL_0000947001 N 0.000
EVEC_0000876601 Enterobius vermicularis EVEC_0000876601 N 0.000
GPLIN_001569000 Globodera pallida GPLIN_001569000 I 0.000
HCOI00218000 Haemonchus contortus HCOI00218000 N 0.000
HCOI01422600 Haemonchus contortus HCOI01422600 N 0.000
HPLM_0000748001 Haemonchus placei HPLM_0000748001 N 0.000
RBPJ Homo sapiens ENSG00000168214 D 0.000
LOAG_17798 Loa loa LOAG_17798 N 0.000
augustus_masked-nMf.1.1.scaf33168-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf33168-processed-gene-0.0 I 0.000
NECAME_17145 Necator americanus NECAME_17145 I 0.000
OESDEN_00868 Oesophagostomum dentatum OESDEN_00868 N 0.000
OFLC_0000481301 Onchocerca flexuosa OFLC_0000481301 N 0.000
nOo.2.0.1.g00014 Onchocerca ochengi nOo.2.0.1.g00014 N 0.000
WBGene00242124 Onchocerca volvulus WBGene00242124 N 0.000
scaffold595-EXSNAP2012.9 Pristionchus exspectatus scaffold595-EXSNAP2012.9 I 0.000
SMUV_0000100801 Syphacia muris SMUV_0000100801 N 0.000
SMUV_0001013801 Syphacia muris SMUV_0001013801 I 0.000
tetur04g02700 Tetranychus urticae tetur04g02700 I 0.000
tetur04g02730 Tetranychus urticae tetur04g02730 I 0.000
TCLT_0000154801 Thelazia callipaeda TCLT_0000154801 N 0.000
TCNE_0000233801 Toxocara canis TCNE_0000233801 N 0.000
WUBG_04020 Wuchereria bancrofti WUBG_04020 N 0.000