CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HCOI00019900
(
Haemonchus contortus
)
ARID/BRIGHT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01388 (ARID)
IPR001606
HCOI00019900
T016554_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HCOI00019900.t1
ARID/BRIGHT
417
503
ERDLFVAQLYKFQEERGTPINRAPILGGKDIDLYRFYRVVQDYGGCKRVTTNQLWRKVLCKLHLEGCPGATPVTVRKAYIRYLAHFN
HCOI00019900.t2
ARID/BRIGHT
417
503
ERDLFVAQLYKFQEERGTPINRAPILGGKDIDLYRFYRVVQDYGGCKRVTTNQLWRKVLCKLHLEGCPGATPVTVRKAYIRYLAHFN
Links
Other
ARID/BRIGHT
family TFs
Other
Haemonchus contortus
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
nAv.1.0.1.g04153
Acanthocheilonema viteae
nAv.1.0.1.g04153
N
0.556
ANCCAN_03211
Ancylostoma caninum
ANCCAN_03211
N
0.742
ASU_07762
Ascaris suum
ASU_07762
N
0.504
Bm7270
Brugia malayi
Bm7270
N
0.593
BTMF_0000251301
Brugia timori
BTMF_0000251301
N
0.593
CGOC_0000383801
Cylicostephanus goldi
CGOC_0000383801
N
0.583
nDi.2.2.2.g06500
Dirofilaria immitis
nDi.2.2.2.g06500
N
0.569
DME_0000078101
Dracunculus medinensis
DME_0000078101
N
0.475
HCOI01500700
Haemonchus contortus
HCOI01500700
N
0.437
HPBE_0000914901
Heligmosomoides bakeri
HPBE_0000914901
N
0.735
nLs.2.1.2.g05187
Litomosoides sigmodontis
nLs.2.1.2.g05187
N
0.569
LOAG_18045
Loa loa
LOAG_18045
N
0.593
OESDEN_10899
Oesophagostomum dentatum
OESDEN_10899
N
0.777
OESDEN_21729
Oesophagostomum dentatum
OESDEN_21729
N
0.777
OFLC_0001133401
Onchocerca flexuosa
OFLC_0001133401
N
0.569
nOo.2.0.1.g02446
Onchocerca ochengi
nOo.2.0.1.g02446
N
0.569
WBGene00243099
Onchocerca volvulus
WBGene00243099
N
0.569
PEQ_0000179401
Parascaris equorum
PEQ_0000179401
N
0.484
TCLT_0000794601
Thelazia callipaeda
TCLT_0000794601
N
0.579
TCNE_0001717001
Toxocara canis
TCNE_0001717001
N
0.512
WUBG_01220
Wuchereria bancrofti
WUBG_01220
N
0.569