Hmga2 (Mus musculus)
AT hook

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02178 (AT_hook) IPR017956 ENSMUSG00000056758 T017415_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Hmga2
M00751_2.00		 Mus musculus
NNNNRHWWNN
NNWWDYNNNN		 PBM
Weirauch et al.(2013)
pTH3046		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ENSPPYG00000004736
M01685_2.00 		Pongo abelii
NNNNDWWW
WWWHNNNN		 PBM
Weirauch et al.(2014)
pTH9279 		0.991 0.923
HMGA2
M09771_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HMGA2_01 		0.991 0.923
HMGA1
M09769_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HMGIY_01 		0.991 0.744
HMGA1
M09770_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HMGIY_Q4 		0.991 0.744
ANIA_01690
M01675_2.00 		Aspergillus nidulans
NNNNRHDDN
NHHDYNNNN		 PBM
Weirauch et al.(2014)
pTH8216 		0.991 0.590
FGRRES_05233
M01104_2.00 		Fusarium graminearum
NNNDWWAWWH
DWWTWWHNNN		 PBM
Lambert et al.(2019)
pTH11377 		0.991 0.538
HMGA
M01671_2.00 		Arabidopsis thaliana
NNNNDWAWH
DWTWHNNNN		 PBM
Weirauch et al.(2014)
pTH7395 		0.991 0.442
SUM1
M07439_2.00 		Saccharomyces cerevisiae
DWAAATWWN
NWWATTTWH		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0398.1 		0.991 0.423
HMG-I Y
M02652_2.00 		Pisum sativum
NDWVAAANRVMRWMAY
RTKWYKBYNTTTBWHN		 SELEX
Mathelier et al.(2014)
MA0045.1 		0.991 0.423
SUM1
M08478_2.00 		Saccharomyces cerevisiae
RYGWCASWAAW
WTTWSTGWCRY		 Misc
DeBoer et al.(2011)
YDR310C_383 		0.991 0.423
SUM1
M08479_2.00 		Saccharomyces cerevisiae
DWAAATWWN
NWWATTTWH		 Misc
DeBoer et al.(2011)
YDR310C_478 		0.991 0.423
AHL13
M01672_2.00 		Arabidopsis thaliana
NAWWTAWWWN
NWWWTAWWTN		 PBM
Weirauch et al.(2014)
pTH8202 		0.991 0.410
NCU05635
M01694_2.00 		Neurospora crassa
NNNWWWWNNN
NNNWWWWNNN		 PBM
Weirauch et al.(2014)
pTH8863 		0.991 0.410
BRADI3G55950
M01673_2.00 		Brachypodium distachyon
NNNNRHDDN
NHHDYNNNN		 PBM
Weirauch et al.(2014)
pTH9369 		0.991 0.385
OS02G0824300
M01688_2.00 		Oryza sativa
NNDWAWWN
NWWTWHNN		 PBM
Weirauch et al.(2014)
pTH8406 		0.991 0.385
VIT_08s0007g04020
M01689_2.00 		Vitis vinifera
DBNDDDDDDN
NHHHHHHNVH		 PBM
Weirauch et al.(2014)
pTH9295 		0.991 0.385
TVAG_474020
M01106_2.00 		Trichomonas vaginalis
DNWWWAWW
WWTWWWNH		 PBM
Lambert et al.(2019)
pTH11493 		0.991 0.385
Q7DLU9_PEA
M09772_2.00 		Pisum sativum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$HMGIY_01 		0.991 0.385
NCU01145
M01693_2.00 		Neurospora crassa
RWATAWWTNN
NNAWWTATWY		 PBM
Weirauch et al.(2014)
pTH8916 		0.991 0.371
FGRRES_17512
M01105_2.00 		Fusarium graminearum
NNNDNWWWW
WWWWNHNNN		 PBM
Lambert et al.(2019)
pTH11412 		0.991 0.359
athp-3
M01691_2.00 		Caenorhabditis elegans
NNDDWDH
DHWHHNN		 PBM
Weirauch et al.(2014)
pTH9097 		0.991 0.355
SUM1
M00008_2.00 		Saccharomyces cerevisiae
NNDWWWH
DWWWHNN		 PBM
Badis et al.(2008)
SUM1_2124 		0.991 0.333
kmt2cb
M01679_2.00 		Danio rerio
WWAWAWAT
ATWTWTWW		 PBM
Weirauch et al.(2014)
pTH7876 		0.991 0.231
hmg-12
M01690_2.00 		Caenorhabditis elegans
NNAWWTAWWTNN
NNAWWTAWWTNN		 PBM
Weirauch et al.(2014)
pTH8997 		0.991 0.222
BRADI5G22430
M01674_2.00 		Brachypodium distachyon
VNRDDDHDD
HHDHHHYNB		 PBM
Weirauch et al.(2014)
pTH9242 		0.991 0.205
PK26376.1
M01108_2.00 		Cannabis sativa
DDWWWAWW
WWTWWWHH		 PBM
Lambert et al.(2019)
pTH11261 		0.991 0.205
ATEG_07399
M01676_2.00 		Aspergillus terreus
DHNNHNDWWW
WWWHNDNNDH		 PBM
Weirauch et al.(2014)
pTH9237 		0.991 0.179
Setbp1
M01683_2.00 		Mus musculus
NDNNNNNNHN
NDNNNNNNHN		 PBM
Weirauch et al.(2014)
pTH1294 		0.991 0.179
Ahctf1
M00750_2.00 		Mus musculus
AAAWAWAW
ATWTWTTT		 PBM
Weirauch et al.(2013)
pTH2361 		0.991 0.179
Xrp1
M01686_2.00 		Drosophila melanogaster
NNNNDWAWW
WWTWHNNNN		 PBM
Weirauch et al.(2014)
pTH9260 		0.991 0.179
MTR_4g101990
M01687_2.00 		Medicago truncatula
AAAWTAAT
ATTAWTTT		 PBM
Weirauch et al.(2014)
pTH9209 		0.991 0.179
estExt_fgeneshNG_pg.C_820014
M01692_2.00 		Naegleria gruberi
NNNNNDRH
DYHNNNNN		 PBM
Weirauch et al.(2014)
pTH9380 		0.991 0.179
PK00377.1
M01107_2.00 		Cannabis sativa
DAWWWAWW
WWTWWWTH		 PBM
Lambert et al.(2019)
pTH11338 		0.991 0.179
Xrp1
M05900_2.00 		Drosophila melanogaster
RTKRYGYAAT
ATTRCRYMAY		 B1H
Zhu et al.(2011)
Xrp1_CG6272_SANGER_5_FBgn0261113 		0.991 0.179
ENSACAG00000014978
M01677_2.00 		Anolis carolinensis
NNNNNDRH
DYHNNNNN		 PBM
Weirauch et al.(2014)
pTH9222 		0.991 0.154
phf21ab
M01678_2.00 		Danio rerio
NNNDNADW
WHTNHNNN		 PBM
Weirauch et al.(2014)
pTH9254 		0.991 0.154
phf21ab
M01680_2.00 		Gasterosteus aculeatus
AAAAWAAA
TTTWTTTT		 PBM
Weirauch et al.(2014)
pTH9180 		0.991 0.154
PHF21A
M01681_2.00 		Meleagris gallopavo
HDNHNNDNHD
HDNHNNDNHD		 PBM
Weirauch et al.(2014)
pTH7875 		0.991 0.154
PHF21A
M01103_2.00 		Monodelphis domestica
NNNAWATWAATN
NATTWATWTNNN		 PBM
Lambert et al.(2019)
pTH9309 		0.991 0.154
PHF21A
M01682_2.00 		Monodelphis domestica
NNNNNHRH
DYDNNNNN		 PBM
Weirauch et al.(2014)
pTH9335 		0.991 0.154
Phf21a
M01684_2.00 		Mus musculus
NNNATATWAATN
NATTWATATNNN		 PBM
Weirauch et al.(2014)
pTH8550 		0.991 0.154
SUM1
M01517_2.00 		Saccharomyces cerevisiae
NNNDWAWW
WWTWHNNN		 PBM
Zhu et al.(2009)
Sum1 		0.991 0.000
For this family, TFs with SR scores > 0.990 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00751_2.00 AT hook 16 28
M00751_2.00 AT hook 36 48
M00751_2.00 AT hook 64 76

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMUSP00000072556 AT hook 26 38
ENSMUSP00000072556 AT hook 46 58
ENSMUSP00000072556 AT hook 74 86
ENSMUSP00000123998 AT hook 26 38
ENSMUSP00000123998 AT hook 46 58
ENSMUSP00000123998 AT hook 74 86

Links

Other AT hook family TFs
Other Mus musculus TFs

1073 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000014907 Ailuropoda melanoleuca ENSAMEG00000014907 I
ENSACAG00000008631 Anolis carolinensis ENSACAG00000008631 I
yakG016733 Bos grunniens yakG016733 N
ENSBTAP00000047496-D1 Bos grunniens ENSBTAP00000047496-D1 I
ENSBTAP00000045775-D1 Bos grunniens ENSBTAP00000045775-D1 N
ENSBTAP00000044770-D1 Bos grunniens ENSBTAP00000044770-D1 I
ENSBTAG00000047120 Bos taurus ENSBTAG00000047120 I
ENSBTAG00000033445 Bos taurus ENSBTAG00000033445 I
ENSBTAG00000033874 Bos taurus ENSBTAG00000033874 N
ENSBTAG00000034444 Bos taurus ENSBTAG00000034444 N
ENSBTAG00000036343 Bos taurus ENSBTAG00000036343 I
ENSBTAG00000046035 Bos taurus ENSBTAG00000046035 N
ENSCJAG00000032803 Callithrix jacchus ENSCJAG00000032803 I
ENSCAFG00000023067 Canis familiaris ENSCAFG00000023067 I
ENSCAFG00000029639 Canis familiaris ENSCAFG00000029639 I
ENSCPOG00000027550 Cavia porcellus ENSCPOG00000027550 I
ENSCPOG00000021607 Cavia porcellus ENSCPOG00000021607 I
ENSDNOG00000031164 Dasypus novemcinctus ENSDNOG00000031164 I
ENSDNOG00000045058 Dasypus novemcinctus ENSDNOG00000045058 I
ENSECAG00000009495 Equus caballus ENSECAG00000009495 I
ENSECAG00000008677 Equus caballus ENSECAG00000008677 I
ENSECAG00000008708 Equus caballus ENSECAG00000008708 I
HSFY2 Homo sapiens ENSG00000169953 D
HSFY1 Homo sapiens ENSG00000172468 D
ENSSTOG00000025684 Ictidomys tridecemlineatus ENSSTOG00000025684 I
ENSLACG00000012431 Latimeria chalumnae ENSLACG00000012431 I
ENSLOCG00000014483 Lepisosteus oculatus ENSLOCG00000014483 I
ENSLAFG00000031072 Loxodonta africana ENSLAFG00000031072 I
ENSLAFG00000016976 Loxodonta africana ENSLAFG00000016976 I
ENSP00000359444 Macaca fascicularis ENSP00000359444 I
ENSMMUG00000002887 Macaca mulatta ENSMMUG00000002887 I
ENSMEUG00000003908 Macropus eugenii ENSMEUG00000003908 I
ENSMODG00000027398 Monodelphis domestica ENSMODG00000027398 I
ENSMODG00000028107 Monodelphis domestica ENSMODG00000028107 I
Hsfy2 Mus musculus ENSMUSG00000045336 I
Myotis_brandtii_HSFY1_10020625 Myotis brandtii Myotis_brandtii_HSFY1_10020625 I
ENSMLUG00000026997 Myotis lucifugus ENSMLUG00000026997 N
ENSMLUG00000015387 Myotis lucifugus ENSMLUG00000015387 I
ENSMLUG00000022730 Myotis lucifugus ENSMLUG00000022730 I
ENSMLUG00000024907 Myotis lucifugus ENSMLUG00000024907 I
ENSMLUG00000025735 Myotis lucifugus ENSMLUG00000025735 N
ENSMLUG00000028032 Myotis lucifugus ENSMLUG00000028032 I
ENSMLUG00000030480 Myotis lucifugus ENSMLUG00000030480 I
ENSNLEG00000013483 Nomascus leucogenys ENSNLEG00000013483 I
ENSOANG00000001091 Ornithorhynchus anatinus ENSOANG00000001091 I
ENSOANG00000028803 Ornithorhynchus anatinus ENSOANG00000028803 I
ENSOCUG00000025707 Oryctolagus cuniculus ENSOCUG00000025707 I
ENSOGAG00000026441 Otolemur garnettii ENSOGAG00000026441 I
ENSOARG00000003920 Ovis aries ENSOARG00000003920 I
ENSOARG00000001582 Ovis aries ENSOARG00000001582 N
ENSOARG00000009396 Ovis aries ENSOARG00000009396 N
ENSOARG00000009275 Ovis aries ENSOARG00000009275 N
ENSOARG00000009065 Ovis aries ENSOARG00000009065 N
ENSOARG00000007974 Ovis aries ENSOARG00000007974 N
ENSOARG00000003931 Ovis aries ENSOARG00000003931 N
ENSOARG00000002777 Ovis aries ENSOARG00000002777 N
ENSPANG00000004032 Papio anubis ENSPANG00000004032 I
Hsfy2 Rattus norvegicus ENSRNOG00000038569 I
ENSSSCG00000012732 Sus scrofa ENSSSCG00000012732 I
ENSSSCG00000012734 Sus scrofa ENSSSCG00000012734 I
ENSTRUG00000004613 Takifugu rubripes ENSTRUG00000004613 I
ENSTRUG00000008763 Takifugu rubripes ENSTRUG00000008763 I
ENSTRUG00000010837 Takifugu rubripes ENSTRUG00000010837 I
ENSTRUG00000015486 Takifugu rubripes ENSTRUG00000015486 I