SMU15001907 (Schmidtea mediterranea)
AT hook

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02178 (AT_hook) IPR017956 SMU15001907 T018093_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TVAG_474020
M01106_2.00 		Trichomonas vaginalis
DNWWWAWW
WWTWWWNH		 PBM
Lambert et al.(2019)
pTH11493 		0.991 0.680
AHL13
M01672_2.00 		Arabidopsis thaliana
NAWWTAWWWN
NWWWTAWWTN		 PBM
Weirauch et al.(2014)
pTH8202 		0.991 0.560
BRADI3G55950
M01673_2.00 		Brachypodium distachyon
NNNNRHDDN
NHHDYNNNN		 PBM
Weirauch et al.(2014)
pTH9369 		0.991 0.560
OS02G0824300
M01688_2.00 		Oryza sativa
NNDWAWWN
NWWTWHNN		 PBM
Weirauch et al.(2014)
pTH8406 		0.991 0.560
VIT_08s0007g04020
M01689_2.00 		Vitis vinifera
DBNDDDDDDN
NHHHHHHNVH		 PBM
Weirauch et al.(2014)
pTH9295 		0.991 0.560
SUM1
M00008_2.00 		Saccharomyces cerevisiae
NNDWWWH
DWWWHNN		 PBM
Badis et al.(2008)
SUM1_2124 		0.991 0.560
SUM1
M07439_2.00 		Saccharomyces cerevisiae
DWAAATWWN
NWWATTTWH		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0398.1 		0.991 0.538
SUM1
M08478_2.00 		Saccharomyces cerevisiae
RYGWCASWAAW
WTTWSTGWCRY		 Misc
DeBoer et al.(2011)
YDR310C_383 		0.991 0.538
SUM1
M08479_2.00 		Saccharomyces cerevisiae
DWAAATWWN
NWWATTTWH		 Misc
DeBoer et al.(2011)
YDR310C_478 		0.991 0.538
Q7DLU9_PEA
M09772_2.00 		Pisum sativum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$HMGIY_01 		0.991 0.520
FGRRES_17512
M01105_2.00 		Fusarium graminearum
NNNDNWWWW
WWWWNHNNN		 PBM
Lambert et al.(2019)
pTH11412 		0.991 0.440
ANIA_01690
M01675_2.00 		Aspergillus nidulans
NNNNRHDDN
NHHDYNNNN		 PBM
Weirauch et al.(2014)
pTH8216 		0.991 0.432
ENSPPYG00000004736
M01685_2.00 		Pongo abelii
NNNNDWWW
WWWHNNNN		 PBM
Weirauch et al.(2014)
pTH9279 		0.991 0.368
BRADI5G22430
M01674_2.00 		Brachypodium distachyon
VNRDDDHDD
HHDHHHYNB		 PBM
Weirauch et al.(2014)
pTH9242 		0.991 0.360
Ahctf1
M00750_2.00 		Mus musculus
AAAWAWAW
ATWTWTTT		 PBM
Weirauch et al.(2013)
pTH2361 		0.991 0.360
estExt_fgeneshNG_pg.C_820014
M01692_2.00 		Naegleria gruberi
NNNNNDRH
DYHNNNNN		 PBM
Weirauch et al.(2014)
pTH9380 		0.991 0.360
Hmga2
M00751_2.00 		Mus musculus
NNNNRHWWNN
NNWWDYNNNN		 PBM
Weirauch et al.(2013)
pTH3046 		0.991 0.359
HMGA2
M09771_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HMGA2_01 		0.991 0.359
HMGA1
M09769_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HMGIY_01 		0.991 0.359
HMGA1
M09770_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HMGIY_Q4 		0.991 0.359
NCU05635
M01694_2.00 		Neurospora crassa
NNNWWWWNNN
NNNWWWWNNN		 PBM
Weirauch et al.(2014)
pTH8863 		0.991 0.342
FGRRES_05233
M01104_2.00 		Fusarium graminearum
NNNDWWAWWH
DWWTWWHNNN		 PBM
Lambert et al.(2019)
pTH11377 		0.991 0.333
ATEG_07399
M01676_2.00 		Aspergillus terreus
DHNNHNDWWW
WWWHNDNNDH		 PBM
Weirauch et al.(2014)
pTH9237 		0.991 0.320
ENSACAG00000014978
M01677_2.00 		Anolis carolinensis
NNNNNDRH
DYHNNNNN		 PBM
Weirauch et al.(2014)
pTH9222 		0.991 0.320
phf21ab
M01678_2.00 		Danio rerio
NNNDNADW
WHTNHNNN		 PBM
Weirauch et al.(2014)
pTH9254 		0.991 0.320
kmt2cb
M01679_2.00 		Danio rerio
WWAWAWAT
ATWTWTWW		 PBM
Weirauch et al.(2014)
pTH7876 		0.991 0.320
phf21ab
M01680_2.00 		Gasterosteus aculeatus
AAAAWAAA
TTTWTTTT		 PBM
Weirauch et al.(2014)
pTH9180 		0.991 0.320
PHF21A
M01681_2.00 		Meleagris gallopavo
HDNHNNDNHD
HDNHNNDNHD		 PBM
Weirauch et al.(2014)
pTH7875 		0.991 0.320
PHF21A
M01103_2.00 		Monodelphis domestica
NNNAWATWAATN
NATTWATWTNNN		 PBM
Lambert et al.(2019)
pTH9309 		0.991 0.320
PHF21A
M01682_2.00 		Monodelphis domestica
NNNNNHRH
DYDNNNNN		 PBM
Weirauch et al.(2014)
pTH9335 		0.991 0.320
Setbp1
M01683_2.00 		Mus musculus
NDNNNNNNHN
NDNNNNNNHN		 PBM
Weirauch et al.(2014)
pTH1294 		0.991 0.320
Phf21a
M01684_2.00 		Mus musculus
NNNATATWAATN
NATTWATATNNN		 PBM
Weirauch et al.(2014)
pTH8550 		0.991 0.320
MTR_4g101990
M01687_2.00 		Medicago truncatula
AAAWTAAT
ATTAWTTT		 PBM
Weirauch et al.(2014)
pTH9209 		0.991 0.320
PK00377.1
M01107_2.00 		Cannabis sativa
DAWWWAWW
WWTWWWTH		 PBM
Lambert et al.(2019)
pTH11338 		0.991 0.320
PK26376.1
M01108_2.00 		Cannabis sativa
DDWWWAWW
WWTWWWHH		 PBM
Lambert et al.(2019)
pTH11261 		0.991 0.320
HMG-I Y
M02652_2.00 		Pisum sativum
NDWVAAANRVMRWMAY
RTKWYKBYNTTTBWHN		 SELEX
Mathelier et al.(2014)
MA0045.1 		0.991 0.308
Xrp1
M01686_2.00 		Drosophila melanogaster
NNNNDWAWW
WWTWHNNNN		 PBM
Weirauch et al.(2014)
pTH9260 		0.991 0.280
Xrp1
M05900_2.00 		Drosophila melanogaster
RTKRYGYAAT
ATTRCRYMAY		 B1H
Zhu et al.(2011)
Xrp1_CG6272_SANGER_5_FBgn0261113 		0.991 0.280
HMGA
M01671_2.00 		Arabidopsis thaliana
NNNNDWAWH
DWTWHNNNN		 PBM
Weirauch et al.(2014)
pTH7395 		0.991 0.250
NCU01145
M01693_2.00 		Neurospora crassa
RWATAWWTNN
NNAWWTATWY		 PBM
Weirauch et al.(2014)
pTH8916 		0.991 0.226
athp-3
M01691_2.00 		Caenorhabditis elegans
NNDDWDH
DHWHHNN		 PBM
Weirauch et al.(2014)
pTH9097 		0.991 0.210
hmg-12
M01690_2.00 		Caenorhabditis elegans
NNAWWTAWWTNN
NNAWWTAWWTNN		 PBM
Weirauch et al.(2014)
pTH8997 		0.991 0.136
SUM1
M01517_2.00 		Saccharomyces cerevisiae
NNNDWAWW
WWTWHNNN		 PBM
Zhu et al.(2009)
Sum1 		0.991 0.000
For this family, TFs with SR scores > 0.990 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SMU15001907 AT hook 446 457
SMU15001907 AT hook 477 489

Links

Other AT hook family TFs
Other Schmidtea mediterranea TFs

1072 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AB06078.1 Alternaria brassicicola AB06078.1 N
AOL_s00097g46 Arthrobotrys oligospora AOL_s00097g46 N
ARB_04542 Arthroderma benhamiae ARB_04542 N
MCYG_05945 Arthroderma otae MCYG_05945 N
ATEG_02532 Aspergillus terreus CADATEAG00003645 N
M437DRAFT_83846 Aureobasidium melanogenum M437DRAFT_83846 N
M438DRAFT_97521 Aureobasidium pullulans M438DRAFT_97521 N
AUEXF2481DRAFT_27191 Aureobasidium subglaciale AUEXF2481DRAFT_27191 N
BBA_07259 Beauveria bassiana BBA_07259 N
COCC4DRAFT_54097 Bipolaris maydis COCC4DRAFT_54097 N
COCMIDRAFT_25841 Bipolaris oryzae COCMIDRAFT_25841 N
COCSADRAFT_221816 Bipolaris sorokiniana COCSADRAFT_221816 N
COCVIDRAFT_99762 Bipolaris victoriae COCVIDRAFT_99762 N
COCCADRAFT_88089 Bipolaris zeicola COCCADRAFT_88089 N
BDDG_07653 Blastomyces dermatitidis BDDG_07653 N
BGHDH14_bgh02243 Blumeria graminis BGHDH14_bgh02243 N
Bcin10g04400 Botrytis cinerea Bcin10g04400 N
PGUG_01009 Candida guilliermondii PGUG_01009 N
A1O1_04095 Capronia coronata A1O1_04095 N
A1O3_01321 Capronia epimyces A1O3_01321 N
PV04_06122 Capronia semiimmersa PV04_06122 N
Z519_04250 Cladophialophora bantiana Z519_04250 N
G647_06777 Cladophialophora carrionii G647_06777 N
PV07_03969 Cladophialophora immunda PV07_03969 N
A1O5_10088 Cladophialophora psammophila A1O5_10088 N
A1O7_05748 Cladophialophora yegresii A1O7_05748 N
CIMG_04804 Coccidioides immitis CIMG_04804 N
CPC735_070400 Coccidioides posadasii CPC735_070400 N
estExt_fgenesh1_pm.C_250032 Cochliobolus heterostrophus C5 estExt_fgenesh1_pm.C_250032 N
CFIO01_13194 Colletotrichum fioriniae CFIO01_13194 N
CGGC5_975 Colletotrichum gloeosporioides CGGC5_975 N
GLRG_01306 Colletotrichum graminicola GLRG_01306 N
CH063_12954 Colletotrichum higginsianum CH063_12954 N
Cob_01758 Colletotrichum orbiculare Cob_01758 N
CSUB01_05390 Colletotrichum sublineola CSUB01_05390 N
W97_02882 Coniosporium apollinis W97_02882 N
HMPREF1541_08408 Cyphellophora europaea HMPREF1541_08408 N
H072_5668 Dactylellina haptotyla H072_5668 N
EV44_g2178 Erysiphe necator EV44_g2178 N
A1O9_04250 Exophiala aquamarina A1O9_04250 N
HMPREF1120_08485 Exophiala dermatitidis HMPREF1120_08485 N
PV10_07750 Exophiala mesophila PV10_07750 N
PV06_00365 Exophiala oligosperma PV06_00365 N
PV08_04239 Exophiala spinifera PV08_04239 N
PV05_05003 Exophiala xenobiotica PV05_05003 N
Z517_00692 Fonsecaea pedrosoi Z517_00692 N
FFUJ_12231 Fusarium fujikuroi FFUJ_12231 N
FGRRES_01915 Fusarium graminearum FGRRES_01915 N
FOXG_04220 Fusarium oxysporum FOXG_04220 N
FOXG_14431 Fusarium oxysporum FOXG_14431 N
FOXG_15050 Fusarium oxysporum FOXG_15050 N
FPSE_09133 Fusarium pseudograminearum FPSE_09133 N
NechaG50578 Fusarium solani NechaG50578 N
FVEG_07339 Fusarium verticillioides FVEG_07339 N
GGTG_14195 Gaeumannomyces graminis GGTG_14195 N
HCBG_00682 Histoplasma capsulatum HCBG_00682 N
MAPG_03921 Magnaporthe poae MAPG_03921 N
MBM_01244 Marssonina brunnea MBM_01244 N
MAC_06449 Metarhizium acridum MAC_06449 N
MANI_018332 Metarhizium anisopliae MANI_018332 N
MBR_07492 Metarhizium brunneum MBR_07492 N
MGU_03784 Metarhizium guizhouense MGU_03784 N
MAJ_03662 Metarhizium majus MAJ_03662 N
X797_003404 Metarhizium robertsii X797_003404 N
PGUG_01009 Meyerozyma guilliermondii PGUG_01009 N
MCYG_05945 Microsporum canis MCYG_05945 N
MGYG_06020 Microsporum gypseum MGYG_06020 N
e_gw1.14.414.1 Mycosphaerella fijiensis e_gw1.14.414.1 N
e_gw1.14.618.1 Nectria haematococca e_gw1.14.618.1 N
OIDMADRAFT_141697 Oidiodendron maius OIDMADRAFT_141697 N
OCS_04024 Ophiocordyceps sinensis OCS_04024 N
PMAA_050990 Penicillium marneffei PMAA_050990 N
PFICI_08362 Pestalotiopsis fici PFICI_08362 N
SNOG_13398 Phaeosphaeria nodorum SNOG_13398 N
PODANS_2_2600 Podospora anserina PODANS_2_2600 N
MYCFIDRAFT_39346 Pseudocercospora fijiensis MYCFIDRAFT_39346 N
GMDG_03182 Pseudogymnoascus destructans GMDG_03182 N
V499_07080 Pseudogymnoascus pannorum V499_07080 N
PTT_11410 Pyrenophora teres PTT_11410 N
PTRG_05162 Pyrenophora triticirepentis PTRG_05162 N
Z518_09578 Rhinocladiella mackenziei Z518_09578 N
SBOR_10075 Sclerotinia borealis SBOR_10075 N
SS1G_12488 Sclerotinia sclerotiorum SS1G_12488 N
SETTUDRAFT_150444 Setosphaeria turcica SETTUDRAFT_150444 N
SEPMUDRAFT_147483 Sphaerulina musiva SEPMUDRAFT_147483 N
SNOG_13398 Stagonospora nodorum SNOG_13398 N
PMAA_050990 Talaromyces marneffei PMAA_050990 N
TSTA_021880 Talaromyces stipitatus TSTA_021880 N
VHEMI10091 Torrubiella hemipterigena VHEMI10091 N
VHEMI10725 Torrubiella hemipterigena VHEMI10725 N
TEQG_04364 Trichophyton equinum TEQG_04364 N
H101_07912 Trichophyton interdigitale H101_07912 N
H102_02396 Trichophyton rubrum H102_02396 N
H105_02417 Trichophyton soudanense H105_02417 N
TESG_07658 Trichophyton tonsurans TESG_07658 N
TRV_02801 Trichophyton verrucosum TRV_02801 N
GSTUM_00009849001 Tuber melanosporum GSTUM_00009849001 N
UREG_06714 Uncinocarpus reesii UREG_06714 N
UV8b_1370 Ustilaginoidea virens UV8b_1370 N
VDBG_09326 Verticillium albo atrum VDBG_09326 N
VDBG_09326 Verticillium alfalfae VDBG_09326 N
VDAG_04562 Verticillium dahliae VDAG_04562 N