Bra018869 (Brassica rapa)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 Bra018869 T018852_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT1G51120
M01696_2.00 		Arabidopsis thaliana
NNNNYRNNNN
NNNNYRNNNN		 PBM
Weirauch et al.(2014)
pTH8659 		0.742 0.742
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra018869.1-P B3 171 277

Links

Other B3 family TFs
Other Brassica rapa TFs

18 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000006857 Ailuropoda melanoleuca ENSAMEG00000006857 N 0.000
ENSAMXG00000010244 Astyanax mexicanus ENSAMXG00000010244 N 0.000
ENSAMXG00000018187 Astyanax mexicanus ENSAMXG00000018187 N 0.000
L3MBTL4 Callithrix jacchus ENSCJAG00000015716 N 0.000
Aan_R010877 Calypte anna Aan_R010877 N 0.000
ENSCSAG00000017582 Chlorocebus sabaeus ENSCSAG00000017582 N 0.000
L3MBTL4 Choloepus hoffmanni ENSCHOG00000003637 N 0.000
l3mbtl3 Danio rerio ENSDARG00000025983 N 0.000
L3MBTL4 Danio rerio ENSDARG00000094780 N 0.000
L3MBTL4 Dasypus novemcinctus ENSDNOG00000006559 N 0.000
L3mbtl4 Dipodomys ordii ENSDORG00000013048 N 0.000
L3MBTL4 Felis catus ENSFCAG00000031842 N 0.000
ENSGMOG00000012699 Gadus morhua ENSGMOG00000012699 N 0.000
L3MBTL4 Gasterosteus aculeatus ENSGACG00000001138 N 0.000
L3MBTL4 Gorilla gorilla ENSGGOG00000015056 N 0.000
L3MBTL4 Homo sapiens ENSG00000154655 N 0.000
ENSLACG00000022431 Latimeria chalumnae ENSLACG00000022431 N 0.000
ENSLOCG00000003008 Lepisosteus oculatus ENSLOCG00000003008 N 0.000
ENSLOCG00000017277 Lepisosteus oculatus ENSLOCG00000017277 N 0.000
LotgiG216594 Lottia gigantea LotgiG216594 N 0.000
ENSP00000382976 Macaca fascicularis ENSP00000382976 N 0.000
L3MBTL4 Macaca mulatta ENSMMUG00000016302 N 0.000
L3MBTL4 Microcebus murinus ENSMICG00000015626 N 0.000
L3MBTL4 Monodelphis domestica ENSMODG00000021457 N 0.000
ENSMPUG00000004964 Mustela putorius furo ENSMPUG00000004964 N 0.000
L3mbtl4 Mus musculus ENSMUSG00000041565 N 0.000
Myotis_brandtii_L3MBTL4_10019905 Myotis brandtii Myotis_brandtii_L3MBTL4_10019905 N 0.000
L3MBTL4 Myotis lucifugus ENSMLUG00000002011 N 0.000
NEMVEDRAFT_v1g20650 Nematostella vectensis NEMVEDRAFT_v1g20650 N 0.000
NEMVEDRAFT_v1g187589 Nematostella vectensis NEMVEDRAFT_v1g187589 N 0.000
ENSNLEG00000006925 Nomascus leucogenys ENSNLEG00000006925 N 0.000
ENSONIG00000015120 Oreochromis niloticus ENSONIG00000015120 N 0.000
L3MBTL4 Oryctolagus cuniculus ENSOCUG00000013013 N 0.000
ENSORLG00000019825 Oryzias latipes ENSORLG00000019825 N 0.000
L3MBTL4 Otolemur garnettii ENSOGAG00000006203 N 0.000
L3MBTL4 Pan troglodytes ENSPTRG00000009845 N 0.000
ENSPANG00000008894 Papio anubis ENSPANG00000008894 N 0.000
ENSPMAG00000002300 Petromyzon marinus ENSPMAG00000002300 N 0.000
ENSPFOG00000009224 Poecilia formosa ENSPFOG00000009224 N 0.000
ENSPPYG00000009022 Pongo abelii ENSPPYG00000009022 N 0.000
L3MBTL4 Pteropus vampyrus ENSPVAG00000002970 N 0.000
L3mbtl4 Rattus norvegicus ENSRNOG00000025273 N 0.000
Sakowv30043999m.g Saccoglossus kowalevskii Sakowv30043999m.g N 0.000
ENSSHAG00000012679 Sarcophilus harrisii ENSSHAG00000012679 N 0.000
L3MBTL4 Sorex araneus ENSSARG00000006794 N 0.000
L3MBTL4 Takifugu rubripes ENSTRUG00000001294 N 0.000
ENSTSYG00000003474 Tarsius syrichta ENSTSYG00000003474 N 0.000
L3MBTL4 Tetraodon nigroviridis ENSTNIG00000004386 N 0.000
L3MBTL4 Tursiops truncatus ENSTTRG00000012966 N 0.000
ENSXMAG00000014347 Xiphophorus maculatus ENSXMAG00000014347 N 0.000