Bra030458 (Brassica rapa)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 Bra030458 T018907_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT1G51120
M01696_2.00 		Arabidopsis thaliana
NNNNYRNNNN
NNNNYRNNNN		 PBM
Weirauch et al.(2014)
pTH8659 		0.771 0.771
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra030458.1-P B3 143 249

Links

Other B3 family TFs
Other Brassica rapa TFs

19 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nAv.1.0.1.g04749 Acanthocheilonema viteae nAv.1.0.1.g04749 I 0.000
nAv.1.0.1.g00051 Acanthocheilonema viteae nAv.1.0.1.g00051 N 0.000
ACYPI001696 Acyrthosiphon pisum ACYPI001696 I 0.000
AAEL002769 Aedes aegypti AAEL002769 N 0.000
ANCCAN_23624 Ancylostoma caninum ANCCAN_23624 I 0.000
ANCCAN_24706 Ancylostoma caninum ANCCAN_24706 I 0.000
ANCCEY_02877 Ancylostoma ceylanicum ANCCEY_02877 I 0.000
ANCDUO_15205 Ancylostoma duodenale ANCDUO_15205 I 0.000
ANCDUO_20174 Ancylostoma duodenale ANCDUO_20174 I 0.000
ACOC_0000703501 Angiostrongylus costaricensis ACOC_0000703501 I 0.000
ASIM_0001696801 Anisakis simplex ASIM_0001696801 N 0.000
AALB003340 Anopheles albimanus AALB003340 I 0.000
AARA009757 Anopheles arabiensis AARA009757 I 0.000
AATE019368 Anopheles atroparvus AATE019368 N 0.000
ACHR007729 Anopheles christyi ACHR007729 I 0.000
ACOM033416 Anopheles coluzzii ACOM033416 N 0.000
ACUA003826 Anopheles culicifacies ACUA003826 I 0.000
ADIR006616 Anopheles dirus ADIR006616 I 0.000
AEPI001687 Anopheles epiroticus AEPI001687 I 0.000
AFAF012033 Anopheles farauti AFAF012033 N 0.000
AFUN011260 Anopheles funestus AFUN011260 N 0.000
AGAP004052 Anopheles gambiae AGAP004052 N 0.000
AMAM006295 Anopheles maculatus AMAM006295 I 0.000
AMEC020934 Anopheles melas AMEC020934 N 0.000
AMEM000031 Anopheles merus AMEM000031 N 0.000
AMIN002618 Anopheles minimus AMIN002618 I 0.000
AQUA008561 Anopheles quadriannulatus AQUA008561 I 0.000
ASTEI07078 Anopheles stephensi ASTEI07078 I 0.000
ASU_00242 Ascaris suum ASU_00242 I 0.000
Bm5024 Brugia malayi Bm5024 I 0.000
BXY_0618400 Bursaphelenchus xylophilus BXY_0618400 N 0.000
CBN10125 Caenorhabditis brenneri CBN10125 I 0.000
CBG22984 Caenorhabditis briggsae CBG22984 I 0.000
pros-1 Caenorhabditis elegans WBGene00000448 D 0.000
CJA12444 Caenorhabditis japonica CJA12444 I 0.000
CRE23850 Caenorhabditis remanei CRE23850 I 0.000
Cflo_00868--XP_392355.3_APIME Camponotus floridanus Cflo_00868--XP_392355.3_APIME I 0.000
CpipJ_CPIJ004052 Culex pipiens CpipJ_CPIJ004052 I 0.000
CPIJ004052 Culex quinquefasciatus CPIJ004052 I 0.000
CGOC_0000822101 Cylicostephanus goldi CGOC_0000822101 I 0.000
KGM_10139 Danaus plexippus KGM_10139 N 0.000
YQE_10516 Dendroctonus ponderosae YQE_10516 I 0.000
DICVIV_00922 Dictyocaulus viviparus DICVIV_00922 N 0.000
DICVIV_00921 Dictyocaulus viviparus DICVIV_00921 I 0.000
nDi.2.2.2.g11480 Dirofilaria immitis nDi.2.2.2.g11480 N 0.000
DME_0000841401 Dracunculus medinensis DME_0000841401 I 0.000
GL11998 Drosophila persimilis FBgn0149606 I 0.000
EVEC_0001110501 Enterobius vermicularis EVEC_0001110501 I 0.000
HCOI02128500 Haemonchus contortus HCOI02128500 I 0.000
HCOI01824000 Haemonchus contortus HCOI01824000 I 0.000
ISCW008733 Ixodes scapularis ISCW008733 N 0.000
LDEC004085 Leptinotarsa decemlineata LDEC004085 N 0.000
nLs.2.1.2.g05095 Litomosoides sigmodontis nLs.2.1.2.g05095 I 0.000
nLs.2.1.2.g05094 Litomosoides sigmodontis nLs.2.1.2.g05094 N 0.000
LOAG_14553 Loa loa LOAG_14553 I 0.000
LOAG_13494 Loa loa LOAG_13494 N 0.000
LCUP011134 Lucilia cuprina LCUP011134 I 0.000
maker-nMf.1.1.scaf00605-augustus-gene-0.8 Meloidogyne floridensis maker-nMf.1.1.scaf00605-augustus-gene-0.8 N 0.000
Minc12662 Meloidogyne incognita Minc12662 N 0.000
MDOA008728 Musca domestica MDOA008728 N 0.000
NV15108 Nasonia vitripennis NV15108 N 0.000
NECAME_07739 Necator americanus NECAME_07739 I 0.000
NECAME_07738 Necator americanus NECAME_07738 I 0.000
NBR_0000066801 Nippostrongylus brasiliensis NBR_0000066801 I 0.000
nOo.2.0.1.g10265 Onchocerca ochengi nOo.2.0.1.g10265 I 0.000
WBGene00244521 Onchocerca volvulus WBGene00244521 I 0.000
PTRK_0001568700 Parastrongyloides trichosuri PTRK_0001568700 I 0.000
PHUM334550 Pediculus humanus PHUM334550 I 0.000
PPAI010076 Phlebotomus papatasi PPAI010076 I 0.000
RSKR_0000081800 Rhabditophanes kr3021 RSKR_0000081800 N 0.000
RPRC009271 Rhodnius prolixus RPRC009271 N 0.000
A_05794 Schistosoma haematobium A_05794 I 0.000
SBAD_0000068201 Soboliphyme baturini SBAD_0000068201 I 0.000
SINV18378 Solenopsis invicta SINV18378 I 0.000
L596_g9976 Steinernema carpocapsae L596_g9976 I 0.000
L889_g22574 Steinernema feltiae L889_g22574 I 0.000
L898_g8569 Steinernema monticolum L898_g8569 I 0.000
L892_g25141 Steinernema scapterisci L892_g25141 I 0.000
SPAL_0001624500 Strongyloides papillosus SPAL_0001624500 I 0.000
SSTP_0000359900 Strongyloides stercoralis SSTP_0000359900 I 0.000
SVE_0442300 Strongyloides venezuelensis SVE_0442300 I 0.000
SVUK_0000405601 Strongylus vulgaris SVUK_0000405601 I 0.000
TELCIR_21732 Teladorsagia circumcincta TELCIR_21732 I 0.000
TELCIR_22329 Teladorsagia circumcincta TELCIR_22329 I 0.000
TC010596 Tribolium castaneum TC010596 N 0.000
D917_07791 Trichinella nativa D917_07791 I 0.000
EFV53283 Trichinella spiralis EFV53283 I 0.000
TMUE_s0183000500 Trichuris muris TMUE_s0183000500 I 0.000
D918_02805 Trichuris suis D918_02805 I 0.000
TTRE_0000134301 Trichuris trichiura TTRE_0000134301 I 0.000
WUBG_10304 Wuchereria bancrofti WUBG_10304 N 0.000
WUBG_06449 Wuchereria bancrofti WUBG_06449 I 0.000