CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLYMA16G01951
(
Glycine max
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
GLYMA16G01951
T019332_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RAV1
M01646_2.00
Arabidopsis thaliana
NCACCTGAHN
NDTCAGGTGN
PBM
Weirauch et al.(2014)
pTH8592
0.733
0.733
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA16G01951.1
B3
195
300
FDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSANEKGLLLNFEDRNGKLWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGVGESYRHRLYIDWKRRR
GLYMA16G01951.2
B3
115
220
FDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSANEKGLLLNFEDRNGKLWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGVGESYRHRLYIDWKRRR
GLYMA16G01951.3
B3
115
220
FDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSANEKGLLLNFEDRNGKLWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGVGESYRHRLYIDWKRRR
Links
Other
B3
family TFs
Other
Glycine max
TFs
261 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AGABI2DRAFT_180216
Agaricus bisporus
AGABI2DRAFT_180216
N
0.000
AWRI1499_4487
Brettanomyces bruxellensis
AWRI1499_4487
I
0.000
G210_4239
Candida maltosa
G210_4239
I
0.000
FOMPIDRAFT_39384
Fomitopsis pinicola
FOMPIDRAFT_39384
N
0.000
M7I_7632
Glarea lozoyensis
M7I_7632
N
0.000
GYMLUDRAFT_893441
Gymnopus luxurians
GYMLUDRAFT_893441
N
0.000
Moror_5215
Moniliophthora roreri
Moror_5215
N
0.000
gw1.4.1763.1
Mucor circinelloides
gw1.4.1763.1
N
0.000
estExt_fgeneshMC_kg.C_30303
Mucor circinelloides
estExt_fgeneshMC_kg.C_30303
N
0.000
PDIP_53990
Penicillium digitatum
PDIP_53990
N
0.000
gwh2.9.410.1
Phanerochaete chrysosporium
gwh2.9.410.1
N
0.000
PHLGIDRAFT_73850
Phlebiopsis gigantea
PHLGIDRAFT_73850
N
0.000
gw1.66.42.1
Phycomyces blakesleeanus
gw1.66.42.1
N
0.000
gw1.1.808.1
Phycomyces blakesleeanus
gw1.1.808.1
N
0.000
gw1.1.777.1
Phycomyces blakesleeanus
gw1.1.777.1
N
0.000
PLEOSDRAFT_18759
Pleurotus ostreatus
PLEOSDRAFT_18759
N
0.000
Z518_08946
Rhinocladiella mackenziei
Z518_08946
N
0.000
M408DRAFT_72496
Serendipita vermifera
M408DRAFT_72496
N
0.000
SERLA73DRAFT_17521
Serpula lacrymans
SERLA73DRAFT_17521
N
0.000
H101_07561
Trichophyton interdigitale
H101_07561
N
0.000
A1Q1_01456
Trichosporon asahii
A1Q1_01456
N
0.000
UV8b_7728
Ustilaginoidea virens
UV8b_7728
N
0.000
VDBG_08894
Verticillium alfalfae
VDBG_08894
N
0.000
YALI0_E16236g
Yarrowia lipolytica
YALI0_E16236g
N
0.000