CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OGLUM01G02860
(
Oryza glumaepatula
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
OGLUM01G02860
T020041_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RAV1
M01646_2.00
Arabidopsis thaliana
NCACCTGAHN
NDTCAGGTGN
PBM
Weirauch et al.(2014)
pTH8592
0.713
0.713
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OGLUM01G02860.1
B3
134
249
FEKAVTPSDVGKLNRLVVPKQHAEKHFPLRRAASSDSASAAAAAATGKGVLLNFEDGEGKVWRFRYSYWNSSQSYVLTKGWSRFVREKGLRAGDAIVFSRSAYGPDKLLFIDCKKN
Links
Other
B3
family TFs
Other
Oryza glumaepatula
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O1_06921
Capronia coronata
A1O1_06921
N
0.000
A1O3_04094
Capronia epimyces
A1O3_04094
N
0.000
PV04_02683
Capronia semiimmersa
PV04_02683
N
0.000
Z519_09269
Cladophialophora bantiana
Z519_09269
N
0.000
G647_09037
Cladophialophora carrionii
G647_09037
N
0.000
PV07_01628
Cladophialophora immunda
PV07_01628
N
0.000
A1O5_12156
Cladophialophora psammophila
A1O5_12156
N
0.000
A1O7_02526
Cladophialophora yegresii
A1O7_02526
N
0.000
HMPREF1120_04939
Exophiala dermatitidis
HMPREF1120_04939
N
0.000
PV10_03576
Exophiala mesophila
PV10_03576
N
0.000
PV06_07847
Exophiala oligosperma
PV06_07847
N
0.000
PV08_03361
Exophiala spinifera
PV08_03361
N
0.000
PV05_07578
Exophiala xenobiotica
PV05_07578
N
0.000
Z517_04420
Fonsecaea pedrosoi
Z517_04420
N
0.000
Z518_02855
Rhinocladiella mackenziei
Z518_02855
N
0.000