CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OMERI12G12160
(
Oryza meridionalis
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
OMERI12G12160
T020272_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OMERI12G12160.1
B3
54
135
LFLQAVPTKFANIIRGQISEVVKLEVPNGKTYDVQVAKEQNELVLRSGWGAFARDYELKQCDILVFTYSGSSRFKVRIFNPS
OMERI12G12160.1
B3
174
265
HATVLPPVLLDKPVTIPKMFAKNVQGQISGVAKLEVPDGRTYDVEIAKEHNELVFRSGWEVFASAYELEQGDILVFAYSGNSHFKVQIFNPS
OMERI12G12160.1
B3
370
462
FFKVMMSVSDIKDELAIPKKFTANVRGKIPEQVRLEVSDGKMYNVQVTEEQDELVLRSGWANFASTYQLKHGDLLVFIHSGHSHFKVLIFDPS
OMERI12G12160.1
B3
579
674
ITAMDISVASGSLVFSKDYAVRYLLDQNRTIKLCQSGGSKTWDISLDMDTDDLYALSTGWLDFFRGNLLQEGDICVFEASKSKRGVALTFHPFKES
OMERI12G12160.1
B3
728
827
FLSVMRSSNCTRQSSLCFSVKYASKYLPHEDQNMRLRLPETKYKCKAALRVDTSTNLHKLLKGWGKFVNDNKLEVHDICLFQLMKNKKKLTMTVHIIRKG
OMERI12G12160.1
B3
866
956
FIKVMITDFKNGVTIPAKFARNFGGQMSGTVKLETRNGKTYEVQVAKELNNLVLRSGWERFASAYELEKGDILVFIQSGNSHFKVWIYDPS
OMERI12G12160.1
B3
1075
1170
FYITVIDKASATDGLLAISKDYAVSYLLDKNETIKLCHSGRSLTWDIGLDIDTDDQYALSTGWLDFIRNNHLQEGDICVFEASKNKRGVALIFHPL
OMERI12G12160.1
B3
1227
1324
FVAVMRESFIRGRSRYMCFSAKYAAKYLPRENNKIMRLRLPKKSYKYKAVFKINNKVHKLGGGWGKFVDDNKLKLGDICLFQLMKDKKKLTMMVMGEK
OMERI12G12160.1
B3
1348
1442
FFRLMTGDFAHGISIPEKVAEIFSGQITKGFNLKSPSGETWRVGIEKVADELILMSGWEDFAKAHELQENDLLFFTCNGHGNGSCSFDVLIFDAS
OMERI12G12160.1
B3
1567
1666
FVAVLQTAHVRRRNILIVPTRFAADHLERKSHDILLIRPNRKQKWSVKYYYLSNTTRGFNCHRWIKFIRENRLREGNVCIFELMKGARRPTMTVHVICKA
OMERI12G12160.2
B3
54
135
LFLQAVPTKFANIIRGQISEVVKLEVPNGKTYDVQVAKEQNELVLRSGWGAFARDYELKQCDILVFTYSGSSRFKVRIFNPS
OMERI12G12160.2
B3
174
265
HATVLPPVLLDKPVTIPKMFAKNVQGQISGVAKLEVPDGRTYDVEIAKEHNELVFRSGWEVFASAYELEQGDILVFAYSGNSHFKVQIFNPS
OMERI12G12160.2
B3
370
462
FFKVMMSVSDIKDELAIPKKFTANVRGKIPEQVRLEVSDGKMYNVQVTEEQDELVLRSGWANFASTYQLKHGDLLVFIHSGHSHFKVLIFDPS
OMERI12G12160.2
B3
579
674
ITAMDISVASGSLVFSKDYAVRYLLDQNRTIKLCQSGGSKTWDISLDMDTDDLYALSTGWLDFFRGNLLQEGDICVFEASKSKRGVALTFHPFKES
OMERI12G12160.2
B3
698
797
YFATNLTNLTDQQERKCFSVKYASKYLPHEDQNMRLRLPETKYKCKAALRVDTSTNLHKLLKGWGKFVNDNKLEVHDICLFQLMKNKKKLTMTVHIIRKG
OMERI12G12160.2
B3
836
926
FIKVMITDFKNGVTIPAKFARNFGGQMSGTVKLETRNGKTYEVQVAKELNNLVLRSGWERFASAYELEKGDILVFIQSGNSHFKVWIYDPS
OMERI12G12160.2
B3
1045
1140
FYITVIDKASATDGLLAISKDYAVSYLLDKNETIKLCHSGRSLTWDIGLDIDTDDQYALSTGWLDFIRNNHLQEGDICVFEASKNKRGVALIFHPL
OMERI12G12160.2
B3
1197
1294
FVAVMRESFIRGRSRYMCFSAKYAAKYLPRENNKIMRLRLPKKSYKYKAVFKINNKVHKLGGGWGKFVDDNKLKLGDICLFQLMKDKKKLTMMVMGEK
OMERI12G12160.2
B3
1318
1412
FFRLMTGDFAHGISIPEKVAEIFSGQITKGFNLKSPSGETWRVGIEKVADELILMSGWEDFAKAHELQENDLLFFTCNGHGNGSCSFDVLIFDAS
OMERI12G12160.2
B3
1537
1636
FVAVLQTAHVRRRNILIVPTRFAADHLERKSHDILLIRPNRKQKWSVKYYYLSNTTRGFNCHRWIKFIRENRLREGNVCIFELMKGARRPTMTVHVICKA
OMERI12G12160.3
B3
54
135
LFLQAVPTKFANIIRGQISEVVKLEVPNGKTYDVQVAKEQNELVLRSGWGAFARDYELKQCDILVFTYSGSSRFKVRIFNPS
OMERI12G12160.3
B3
174
265
HATVLPPVLLDKPVTIPKMFAKNVQGQISGVAKLEVPDGRTYDVEIAKEHNELVFRSGWEVFASAYELEQGDILVFAYSGNSHFKVQIFNPS
OMERI12G12160.3
B3
320
412
FFKVMMSVSDIKDELAIPKKFTANVRGKIPEQVRLEVSDGKMYNVQVTEEQDELVLRSGWANFASTYQLKHGDLLVFIHSGHSHFKVLIFDPS
OMERI12G12160.3
B3
529
624
ITAMDISVASGSLVFSKDYAVRYLLDQNRTIKLCQSGGSKTWDISLDMDTDDLYALSTGWLDFFRGNLLQEGDICVFEASKSKRGVALTFHPFKES
OMERI12G12160.3
B3
648
747
YFATNLTNLTDQQERKCFSVKYASKYLPHEDQNMRLRLPETKYKCKAALRVDTSTNLHKLLKGWGKFVNDNKLEVHDICLFQLMKNKKKLTMTVHIIRKG
OMERI12G12160.3
B3
786
876
FIKVMITDFKNGVTIPAKFARNFGGQMSGTVKLETRNGKTYEVQVAKELNNLVLRSGWERFASAYELEKGDILVFIQSGNSHFKVWIYDPS
OMERI12G12160.3
B3
995
1090
FYITVIDKASATDGLLAISKDYAVSYLLDKNETIKLCHSGRSLTWDIGLDIDTDDQYALSTGWLDFIRNNHLQEGDICVFEASKNKRGVALIFHPL
OMERI12G12160.3
B3
1147
1244
FVAVMRESFIRGRSRYMCFSAKYAAKYLPRENNKIMRLRLPKKSYKYKAVFKINNKVHKLGGGWGKFVDDNKLKLGDICLFQLMKDKKKLTMMVMGEK
OMERI12G12160.3
B3
1268
1362
FFRLMTGDFAHGISIPEKVAEIFSGQITKGFNLKSPSGETWRVGIEKVADELILMSGWEDFAKAHELQENDLLFFTCNGHGNGSCSFDVLIFDAS
OMERI12G12160.3
B3
1487
1586
FVAVLQTAHVRRRNILIVPTRFAADHLERKSHDILLIRPNRKQKWSVKYYYLSNTTRGFNCHRWIKFIRENRLREGNVCIFELMKGARRPTMTVHVICKA
Links
Other
B3
family TFs
Other
Oryza meridionalis
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OBART09G00080
Oryza barthii
OBART09G00080
N
ORGLA09G0000600
Oryza glaberrima
ORGLA09G0000600
N
OGLUM09G00060
Oryza glumaepatula
OGLUM09G00060
N
BGIOSGA030258
Oryza indica
BGIOSGA030258
N
OLONG_022715
Oryza longistaminata
OLONG_022715
N
OMERI09G00060
Oryza meridionalis
OMERI09G00060
N
OPUNC09G00020
Oryza punctata
OPUNC09G00020
N
ORUFI09G00110
Oryza rufipogon
ORUFI09G00110
N