POPTR_0009s11170 (Populus trichocarpa)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 POPTR_0009s11170 T020881_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
VRN1
M06704_2.00 		Arabidopsis thaliana
WWWTTTTTTTTTTTTTTTTTTTTTTTKTN
NAMAAAAAAAAAAAAAAAAAAAAAAAWWW		 Dap-seq
OMalley et al.(2016)
VRN1_col_a 		0.730 0.730
VRN1
M06705_2.00 		Arabidopsis thaliana
NWBNTTTTTTTTTTTTKKB
VMMAAAAAAAAAAAANVWN		 Dap-seq
OMalley et al.(2016)
VRN1_colamp_a 		0.730 0.730
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0009s11170.1 B3 5 98
POPTR_0009s11170.1 B3 277 371
POPTR_0009s11170.2 B3 5 98

Links

Other B3 family TFs
Other Populus trichocarpa TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AOL_s00006g360 Arthrobotrys oligospora AOL_s00006g360 N 0.000
MCYG_07865 Arthroderma otae MCYG_07865 N 0.000
e_gw1.00083.293.1 Aspergillus carbonarius e_gw1.00083.293.1 N 0.000
CADAFLAG00004656 Aspergillus flavus CADAFLAG00004656 N 0.000
ANIA_00585 Aspergillus nidulans CADANIAG00002091 N 0.000
CADANGAG00007095 Aspergillus niger CADANGAG00007095 N 0.000
EURHEDRAFT_514237 Aspergillus ruber EURHEDRAFT_514237 N 0.000
ATEG_05057 Aspergillus terreus CADATEAG00003790 N 0.000
COCC4DRAFT_69368 Bipolaris maydis COCC4DRAFT_69368 N 0.000
COCMIDRAFT_95290 Bipolaris oryzae COCMIDRAFT_95290 N 0.000
COCSADRAFT_173949 Bipolaris sorokiniana COCSADRAFT_173949 N 0.000
COCVIDRAFT_96245 Bipolaris victoriae COCVIDRAFT_96245 N 0.000
COCCADRAFT_97412 Bipolaris zeicola COCCADRAFT_97412 N 0.000
BDDG_05127 Blastomyces dermatitidis BDDG_05127 N 0.000
PVAR5_6382 Byssochlamys spectabilis PVAR5_6382 N 0.000
A1O3_05308 Capronia epimyces A1O3_05308 N 0.000
PV04_08708 Capronia semiimmersa PV04_08708 N 0.000
Z519_01401 Cladophialophora bantiana Z519_01401 N 0.000
G647_07147 Cladophialophora carrionii G647_07147 N 0.000
PV07_01120 Cladophialophora immunda PV07_01120 N 0.000
A1O5_02077 Cladophialophora psammophila A1O5_02077 N 0.000
CIMG_00230 Coccidioides immitis CIMG_00230 N 0.000
CPC735_059410 Coccidioides posadasii CPC735_059410 N 0.000
estExt_fgenesh1_pm.C_60144 Cochliobolus heterostrophus C5 estExt_fgenesh1_pm.C_60144 N 0.000
CCM_04085 Cordyceps militaris CCM_04085 N 0.000
H072_10515 Dactylellina haptotyla H072_10515 N 0.000
PV10_04907 Exophiala mesophila PV10_04907 N 0.000
PV06_05029 Exophiala oligosperma PV06_05029 N 0.000
PV08_09166 Exophiala spinifera PV08_09166 N 0.000
PV05_00707 Exophiala xenobiotica PV05_00707 N 0.000
Z517_04949 Fonsecaea pedrosoi Z517_04949 N 0.000
HCBG_05107 Histoplasma capsulatum HCBG_05107 N 0.000
LEMA_P054810.1 Leptosphaeria maculans LEMA_P054810.1 N 0.000
MGG_12349 Magnaporthe oryzae MGG_12349 N 0.000
MCYG_07865 Microsporum canis MCYG_07865 N 0.000
MGYG_04895 Microsporum gypseum MGYG_04895 N 0.000
PABG_00984 Paracoccidioides brasiliensis PABG_00984 N 0.000
PAAG_03968 Paracoccidioides sp lutzii PAAG_03968 N 0.000
PMAA_052680 Penicillium marneffei PMAA_052680 N 0.000
PDE_07989 Penicillium oxalicum PDE_07989 N 0.000
SNOG_07097 Phaeosphaeria nodorum SNOG_07097 N 0.000
PTRG_00913 Pyrenophora triticirepentis PTRG_00913 N 0.000
SETTUDRAFT_156877 Setosphaeria turcica SETTUDRAFT_156877 N 0.000
SNOG_07097 Stagonospora nodorum SNOG_07097 N 0.000
PMAA_052680 Talaromyces marneffei PMAA_052680 N 0.000
TSTA_020260 Talaromyces stipitatus TSTA_020260 N 0.000
TEQG_00337 Trichophyton equinum TEQG_00337 N 0.000
H101_06010 Trichophyton interdigitale H101_06010 N 0.000
H105_06448 Trichophyton soudanense H105_06448 N 0.000
TESG_04458 Trichophyton tonsurans TESG_04458 N 0.000
UREG_00319 Uncinocarpus reesii UREG_00319 N 0.000