CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TCM_040397
(
Theobroma cacao
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
TCM_040397
T021546_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AT1G51120
M01696_2.00
Arabidopsis thaliana
NNNNYRNNNN
NNNNYRNNNN
PBM
Weirauch et al.(2014)
pTH8659
0.796
0.796
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EOY32454
B3
171
274
FQKELTPSDVGKLNRLVIPKKYAVKYFPYICENDEENVAGVGVEEMELVFYDRLMRTWKFRYCYWRSSQSFVFTRGWNRFVKEKKLKERDIITFHTCECPALVE
Links
Other
B3
family TFs
Other
Theobroma cacao
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACYPI28321
Acyrthosiphon pisum
ACYPI28321
I
H311_03552
Anncaliia algerae
H311_03552
I
YQE_12606
Dendroctonus ponderosae
YQE_12606
I
GF17994
Drosophila ananassae
FBgn0095012
I
GG24188
Drosophila erecta
FBgn0085045
I
GH15916
Drosophila grimshawi
FBgn0123387
I
CG15696
Drosophila melanogaster
FBgn0038833
D
GI10602
Drosophila mojavensis
FBgn0133366
I
GL24283
Drosophila persimilis
FBgn0161873
I
GA13896
Drosophila pseudoobscura
FBgn0073928
I
GM23140
Drosophila sechellia
FBgn0178008
I
GJ22956
Drosophila virilis
FBgn0210059
I
GK22474
Drosophila willistoni
FBgn0224451
I
GE25692
Drosophila yakuba
FBgn0084486
I
EDEG_02526
Edhazardia aedis
EDEG_02526
I
CAD25284
Encephalitozoon cuniculi
CAD25284
D
EHEL_040890
Encephalitozoon hellem
EHEL_040890
I
EROM_040930
Encephalitozoon romaleae
EROM_040930
I
D915_03631
Fasciola hepatica
D915_03631
I
LotgiG169884
Lottia gigantea
LotgiG169884
I
LCUP001362
Lucilia cuprina
LCUP001362
I
MDOA010523
Musca domestica
MDOA010523
I
NEMVEDRAFT_v1g80394
Nematostella vectensis
NEMVEDRAFT_v1g80394
D
A_06265
Schistosoma haematobium
A_06265
I
Smp_000075
Schistosoma mansoni
Smp_000075
I
tetur05g02800
Tetranychus urticae
tetur05g02800
I
TC015928
Tribolium castaneum
TC015928
I
TriadG51739
Trichoplax adhaerens
TriadG51739
I