Carubv10023656m.g (Capsella rubella)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Carubv10023656m.g T022895_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10023656m B3 43 149

Links

Other B3 family TFs
Other Capsella rubella TFs

261 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000017438 Ailuropoda melanoleuca ENSAMEG00000017438 I
Alligator_sinensis_CCG009162.1 Alligator sinensis Alligator_sinensis_CCG009162.1 I
ENSAPLG00000007458 Anas platyrhynchos ENSAPLG00000007458 I
CTCF Anolis carolinensis ENSACAG00000001050 I
Afo_R001863 Aptenodytes forsteri Afo_R001863 I
ENSBTAP00000018279-D1 Bos grunniens ENSBTAP00000018279-D1 I
CTCF Bos taurus ENSBTAG00000013757 I
Brh_R001555 Buceros rhinoceros Brh_R001555 I
CTCF Callithrix jacchus ENSCJAG00000016139 I
Aan_R007092 Calypte anna Aan_R007092 I
CTCF Canis familiaris ENSCAFG00000020355 I
CTCF Cavia porcellus ENSCPOG00000010698 I
Cmyd_10002494 Chelonia mydas Cmyd_10002494 I
ENSCSAG00000003911 Chlorocebus sabaeus ENSCSAG00000003911 I
ctcf Danio rerio ENSDARG00000056621 I
CTCF Dasypus novemcinctus ENSDNOG00000038156 I
CTCF Equus caballus ENSECAG00000015924 I
CTCF Felis catus ENSFCAG00000003492 I
ENSFALG00000007163 Ficedula albicollis ENSFALG00000007163 I
ENSGMOG00000006386 Gadus morhua ENSGMOG00000006386 I
CTCF Gallus gallus ENSGALG00000001817 I
ctcf Gasterosteus aculeatus ENSGACG00000002504 I
ctcf Gasterosteus aculeatus ENSGACG00000015865 I
Gfo_R016015 Geospiza fortis Gfo_R016015 I
CTCF Gorilla gorilla ENSGGOG00000001063 I
CTCF Homo sapiens ENSG00000102974 D
ENSSTOG00000024951 Ictidomys tridecemlineatus ENSSTOG00000024951 I
ENSLACG00000009833 Latimeria chalumnae ENSLACG00000009833 I
CTCF Loxodonta africana ENSLAFG00000007101 I
ENSP00000264010 Macaca fascicularis ENSP00000264010 I
CTCF Meleagris gallopavo ENSMGAG00000002200 I
CTCF Microcebus murinus ENSMICG00000012128 I
CTCF Monodelphis domestica ENSMODG00000005757 I
ENSMPUG00000006401 Mustela putorius furo ENSMPUG00000006401 I
Ctcf Mus musculus ENSMUSG00000005698 D
Myotis_brandtii_Ctcf_10015071 Myotis brandtii Myotis_brandtii_Ctcf_10015071 I
CTCF Myotis lucifugus ENSMLUG00000005216 I
ENSNLEG00000004747 Nomascus leucogenys ENSNLEG00000004747 I
CTCF Ochotona princeps ENSOPRG00000013470 I
ENSONIG00000004097 Oreochromis niloticus ENSONIG00000004097 I
ENSONIG00000005736 Oreochromis niloticus ENSONIG00000005736 I
CTCF Oryctolagus cuniculus ENSOCUG00000008983 I
ctcf Oryzias latipes ENSORLG00000008771 I
ctcf Oryzias latipes ENSORLG00000018357 I
CTCF Otolemur garnettii ENSOGAG00000011901 I
CTCF Pan troglodytes ENSPTRG00000008235 I
ENSPANG00000015703 Papio anubis ENSPANG00000015703 I
ENSPFOG00000001478 Poecilia formosa ENSPFOG00000001478 I
ENSPFOG00000001733 Poecilia formosa ENSPFOG00000001733 I
Pvit_02093 Pogona vitticeps Pvit_02093 I
ENSPPYG00000007461 Pongo abelii ENSPPYG00000007461 I
CTCF Procavia capensis ENSPCAG00000009389 I
CTCF Pteropus vampyrus ENSPVAG00000016588 I
Ctcf Rattus norvegicus ENSRNOG00000017674 I
ENSSHAG00000003783 Sarcophilus harrisii ENSSHAG00000003783 I
CTCF Sorex araneus ENSSARG00000006220 I
ctcf Takifugu rubripes ENSTRUG00000017943 I
ctcf Tetraodon nigroviridis ENSTNIG00000009314 I
CTCF Tursiops truncatus ENSTTRG00000009184 I
Tal_R013354 Tyto alba Tal_R013354 I
CTCF Vicugna pacos ENSVPAG00000004409 I
ctcf.L Xenopus laevis XB-GENE-864809 I
ctcf Xenopus tropicalis XB-GENE-862914 I
ENSXMAG00000016342 Xiphophorus maculatus ENSXMAG00000016342 I
ENSXMAG00000014187 Xiphophorus maculatus ENSXMAG00000014187 I