CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ciclev10000881m.g
(
Citrus clementina
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
Ciclev10000881m.g
T022927_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ciclev10000744m
B3
15
106
FFNIFSSNLSAECLKLPLQFVRHMEGRTSGSVTLIGPSWDTWHIDLIQQDDNLFFDKGWPVFLRDNFIECGDLLVFRYDGELHFTVQIFDQS
Ciclev10000744m
B3
212
308
FVRKMKRFNVSGSYTLNIPYQFSMAHLPNFKTEVVLHNLKGASWTVNSVPTTKVHTSHTFCGGWLAFVRGNEIKLGDICIFELVHKCELHVYILRVG
Ciclev10000744m
B3
434
529
FVRIMRKFNISGSYTLKIPYKFAMAHLPDCKTEIVLRNLKGECWTVNSLPDSKGRMVHTFCGGWMAFVRGNDIKIGDVCIFELISKLDMRVHITGV
Ciclev10000746m
B3
15
106
FFNIFSSNLSAECLKLPLQFVRHMEGRTSGSVTLIGPSWDTWHIDLIQQDDNLFFDKGWPVFLRDNFIECGDLLVFRYDGELHFTVQIFDQS
Ciclev10000746m
B3
212
308
FVRKMKRFNVSGSYTLNIPYQFSMAHLPNFKTEVVLHNLKGASWTVNSVPTTKVHTSHTFCGGWLAFVRGNEIKLGDICIFELVHKCELHVYILRVG
Ciclev10000746m
B3
434
529
FVRIMRKFNISGSYTLKIPYKFAMAHLPDCKTEIVLRNLKGECWTVNSLPDSKGRMVHTFCGGWMAFVRGNDIKIGDVCIFELISKLDMRVHITGV
Ciclev10000879m
B3
1
69
MEGRTSGSVTLIGPSWDTWHIDLIQQDDNLFFDKGWPVFLRDNFIECGDLLVFRYDGELHFTVQIFDQS
Ciclev10000879m
B3
175
271
FVRKMKRFNVSGSYTLNIPYQFSMAHLPNFKTEVVLHNLKGASWTVNSVPTTKVHTSHTFCGGWLAFVRGNEIKLGDICIFELVHKCELHVYILRVG
Ciclev10000879m
B3
397
492
FVRIMRKFNISGSYTLKIPYKFAMAHLPDCKTEIVLRNLKGECWTVNSLPDSKGRMVHTFCGGWMAFVRGNDIKIGDVCIFELISKLDMRVHITGV
Ciclev10000881m
B3
1
69
MEGRTSGSVTLIGPSWDTWHIDLIQQDDNLFFDKGWPVFLRDNFIECGDLLVFRYDGELHFTVQIFDQS
Ciclev10000881m
B3
175
271
FVRKMKRFNVSGSYTLNIPYQFSMAHLPNFKTEVVLHNLKGASWTVNSVPTTKVHTSHTFCGGWLAFVRGNEIKLGDICIFELVHKCELHVYILRVG
Ciclev10000881m
B3
397
492
FVRIMRKFNISGSYTLKIPYKFAMAHLPDCKTEIVLRNLKGECWTVNSLPDSKGRMVHTFCGGWMAFVRGNDIKIGDVCIFELISKLDMRVHITGV
Ciclev10000882m
B3
1
69
MEGRTSGSVTLIGPSWDTWHIDLIQQDDNLFFDKGWPVFLRDNFIECGDLLVFRYDGELHFTVQIFDQS
Ciclev10000882m
B3
175
271
FVRKMKRFNVSGSYTLNIPYQFSMAHLPNFKTEVVLHNLKGASWTVNSVPTTKVHTSHTFCGGWLAFVRGNEIKLGDICIFELVHKCELHVYILRVG
Ciclev10000882m
B3
397
492
FVRIMRKFNISGSYTLKIPYKFAMAHLPDCKTEIVLRNLKGECWTVNSLPDSKGRMVHTFCGGWMAFVRGNDIKIGDVCIFELISKLDMRVHITGV
Ciclev10000883m
B3
1
69
MEGRTSGSVTLIGPSWDTWHIDLIQQDDNLFFDKGWPVFLRDNFIECGDLLVFRYDGELHFTVQIFDQS
Ciclev10000883m
B3
175
271
FVRKMKRFNVSGSYTLNIPYQFSMAHLPNFKTEVVLHNLKGASWTVNSVPTTKVHTSHTFCGGWLAFVRGNEIKLGDICIFELVHKCELHVYILRVG
Ciclev10000883m
B3
397
492
FVRIMRKFNISGSYTLKIPYKFAMAHLPDCKTEIVLRNLKGECWTVNSLPDSKGRMVHTFCGGWMAFVRGNDIKIGDVCIFELISKLDMRVHITGV
Ciclev10001404m
B3
15
106
FFNIFSSNLSAECLKLPLQFVRHMEGRTSGSVTLIGPSWDTWHIDLIQQDDNLFFDKGWPVFLRDNFIECGDLLVFRYDGELHFTVQIFDQS
Ciclev10001404m
B3
212
308
FVRKMKRFNVSGSYTLNIPYQFSMAHLPNFKTEVVLHNLKGASWTVNSVPTTKVHTSHTFCGGWLAFVRGNEIKLGDICIFELVHKCELHVYILRVG
Ciclev10001631m
B3
1
69
MEGRTSGSVTLIGPSWDTWHIDLIQQDDNLFFDKGWPVFLRDNFIECGDLLVFRYDGELHFTVQIFDQS
Ciclev10001631m
B3
175
271
FVRKMKRFNVSGSYTLNIPYQFSMAHLPNFKTEVVLHNLKGASWTVNSVPTTKVHTSHTFCGGWLAFVRGNEIKLGDICIFELVHKCELHVYILRVG
Ciclev10001633m
B3
1
69
MEGRTSGSVTLIGPSWDTWHIDLIQQDDNLFFDKGWPVFLRDNFIECGDLLVFRYDGELHFTVQIFDQS
Ciclev10001633m
B3
175
271
FVRKMKRFNVSGSYTLNIPYQFSMAHLPNFKTEVVLHNLKGASWTVNSVPTTKVHTSHTFCGGWLAFVRGNEIKLGDICIFELVHKCELHVYILRVG
Links
Other
B3
family TFs
Other
Citrus clementina
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PK10894.1
Cannabis sativa
PK10894.1
N
0.703
orange1.1g039936m.g
Citrus sinensis
orange1.1g039936m.g
N
0.988
cassava12949.valid.m1
Manihot esculenta
cassava12949.valid.m1
N
0.709
cassava12950.valid.m1
Manihot esculenta
cassava12950.valid.m1
N
0.709
PRUPE_ppa003541mg
Prunus persica
PRUPE_ppa003541mg
N
0.710