CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Ciclev10029114m.g
(
Citrus clementina
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
Ciclev10029114m.g
T022974_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ciclev10029114m
B3
1
58
MVPNGRVWRVKLMKDGRRVSFGDGWQDFVASNSISVGYFLVFRYEKNSTFQVLIHDMT
Ciclev10029114m
B3
153
253
FMVIFRKREKPCREVYVPASFAYRFVNQNVKSIKLRGSNAELNLPRSDKSVRIWWRDNGGFYLTRGWMKFSTHKNLKDGDICIFKLIDRKDVLLELSVFRA
Ciclev10029118m
B3
1
58
MVPNGRVWRVKLMKDGRRVSFGDGWQDFVASNSISVGYFLVFRYEKNSTFQVLIHDMT
Ciclev10029118m
B3
153
253
FMVIFRKREKPCREVYVPASFAYRFVNQNVKSIKLRGSNAELNLPRSDKSVRIWWRDNGGFYLTRGWMKFSTHKNLKDGDICIFKLIDRKDVLLELSVFRA
Links
Other
B3
family TFs
Other
Citrus clementina
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000011254
Ailuropoda melanoleuca
ENSAMEG00000011254
I
Alligator_sinensis_CCG018915.1
Alligator sinensis
Alligator_sinensis_CCG018915.1
I
ENSAPLG00000007145
Anas platyrhynchos
ENSAPLG00000007145
I
ENSACAG00000007699
Anolis carolinensis
ENSACAG00000007699
I
Afo_R005277
Aptenodytes forsteri
Afo_R005277
I
ENSBTAP00000012060-D1
Bos grunniens
ENSBTAP00000012060-D1
I
MLXIPL
Bos taurus
ENSBTAG00000009153
I
MLXIPL
Callithrix jacchus
ENSCJAG00000016824
I
Aan_R007283
Calypte anna
Aan_R007283
I
MLXIPL
Canis familiaris
ENSCAFG00000012970
I
MLXIPL
Cavia porcellus
ENSCPOG00000010276
I
MLXIPL
Dasypus novemcinctus
ENSDNOG00000038567
I
Mlxipl
Dipodomys ordii
ENSDORG00000012167
I
MLXIPL
Echinops telfairi
ENSETEG00000008859
I
MLXIPL
Equus caballus
ENSECAG00000021590
I
MLXIPL
Felis catus
ENSFCAG00000004749
I
ENSFALG00000013690
Ficedula albicollis
ENSFALG00000013690
I
Gfo_R013572
Geospiza fortis
Gfo_R013572
I
MLXIPL
Gorilla gorilla
ENSGGOG00000016962
I
MLXIPL
Homo sapiens
ENSG00000009950
D
ENSSTOG00000027367
Ictidomys tridecemlineatus
ENSSTOG00000027367
I
MLXIPL
Loxodonta africana
ENSLAFG00000000706
I
ENSP00000320886
Macaca fascicularis
ENSP00000320886
I
ENSMPUG00000016074
Mustela putorius furo
ENSMPUG00000016074
I
Mlxipl
Mus musculus
ENSMUSG00000005373
I
Myotis_brandtii_MLXIPL_10014270
Myotis brandtii
Myotis_brandtii_MLXIPL_10014270
I
MLXIPL
Myotis lucifugus
ENSMLUG00000005594
I
MLXIPL
Ochotona princeps
ENSOPRG00000002458
I
Ogr07070
Ophisaurus gracilis
Ogr07070
I
MLXIPL
Otolemur garnettii
ENSOGAG00000015010
I
MLXIPL
Pan troglodytes
ENSPTRG00000019274
I
ENSPANG00000008676
Papio anubis
ENSPANG00000008676
I
ENSPSIG00000015212
Pelodiscus sinensis
ENSPSIG00000015212
I
Pvit_11967
Pogona vitticeps
Pvit_11967
I
ENSPPYG00000017501
Pongo abelii
ENSPPYG00000017501
I
MLXIPL
Procavia capensis
ENSPCAG00000010393
I
MLXIPL
Pteropus vampyrus
ENSPVAG00000016410
I
ENSSHAG00000015886
Sarcophilus harrisii
ENSSHAG00000015886
I
MLXIPL
Sus scrofa
ENSSSCG00000007710
I
MLXIPL
Taeniopygia guttata
ENSTGUG00000003070
I
MLXIPL
Tursiops truncatus
ENSTTRG00000016482
I