CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.009G173100
(
Gossypium raimondii
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
Gorai.009G173100
T023375_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.009G173100.1
B3
340
441
FEKMLSASDAGRIGRLVLPKKCAEAHFPPISQPEGLPLKVQDSKGKEWIFQFRFWPNNNSRMYVLEGVTPCIQNMQVQAGDVVTFSRLEPGGKLVMGFRKAS
Gorai.009G173100.2
B3
340
441
FEKMLSASDAGRIGRLVLPKKCAEAHFPPISQPEGLPLKVQDSKGKEWIFQFRFWPNNNSRMYVLEGVTPCIQNMQVQAGDVVTFSRLEPGGKLVMGFRKAS
Links
Other
B3
family TFs
Other
Gossypium raimondii
TFs
185 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000001827
Ailuropoda melanoleuca
ENSAMEG00000001827
N
ENSP00000296096-D1
Bos grunniens
ENSP00000296096-D1
N
TCF23
Bos taurus
ENSBTAG00000014813
N
TCF23
Callithrix jacchus
ENSCJAG00000001198
N
TCF23
Canis familiaris
ENSCAFG00000030192
N
ENSCPOG00000003785
Cavia porcellus
ENSCPOG00000003785
N
Cmyd_10002847
Chelonia mydas
Cmyd_10002847
N
ENSCSAG00000009631
Chlorocebus sabaeus
ENSCSAG00000009631
N
TCF23
Choloepus hoffmanni
ENSCHOG00000004803
N
ENSDNOG00000030981
Dasypus novemcinctus
ENSDNOG00000030981
N
Tcf23
Dipodomys ordii
ENSDORG00000014403
N
TCF23
Equus caballus
ENSECAG00000021374
N
TCF23
Erinaceus europaeus
ENSEEUG00000007250
N
TCF23
Felis catus
ENSFCAG00000022795
N
TCF23
Gorilla gorilla
ENSGGOG00000002612
N
TCF23
Homo sapiens
ENSG00000163792
N
ENSSTOG00000015523
Ictidomys tridecemlineatus
ENSSTOG00000015523
N
ENSLOCG00000015901
Lepisosteus oculatus
ENSLOCG00000015901
N
TCF23
Loxodonta africana
ENSLAFG00000014587
N
ENSP00000296096
Macaca fascicularis
ENSP00000296096
N
TCF23
Macaca mulatta
ENSMMUG00000015867
N
ENSMEUG00000010665
Macropus eugenii
ENSMEUG00000010665
N
TCF23
Monodelphis domestica
ENSMODG00000015714
N
Tcf23
Mus musculus
ENSMUSG00000006642
N
Myotis_brandtii_TCF23_10031193
Myotis brandtii
Myotis_brandtii_TCF23_10031193
N
ENSNLEG00000003009
Nomascus leucogenys
ENSNLEG00000003009
N
ENSOPRG00000010556
Ochotona princeps
ENSOPRG00000010556
N
TCF23
Ornithorhynchus anatinus
ENSOANG00000003936
N
ENSOCUG00000008655
Oryctolagus cuniculus
ENSOCUG00000008655
N
TCF23
Otolemur garnettii
ENSOGAG00000006528
N
ENSOARG00000019168
Ovis aries
ENSOARG00000019168
N
TCF23
Pan troglodytes
ENSPTRG00000011753
N
ENSPANG00000009856
Papio anubis
ENSPANG00000009856
N
ENSPPYG00000012560
Pongo abelii
ENSPPYG00000012560
N
ENSPVAG00000015152
Pteropus vampyrus
ENSPVAG00000015152
N
Tcf23
Rattus norvegicus
ENSRNOG00000025736
N
ENSSHAG00000012462
Sarcophilus harrisii
ENSSHAG00000012462
N
TCF23
Sus scrofa
ENSSSCG00000027409
N
TCF23
Tupaia belangeri
ENSTBEG00000006967
N
TCF23
Tursiops truncatus
ENSTTRG00000005255
N