CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Gorai.013G267100
(
Gossypium raimondii
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
Gorai.013G267100
T023427_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ARF16
M06708_2.00
Arabidopsis thaliana
TTTACGKTTTTGGCGGRAAAA
TTTTYCCGCCAAAAMCGTAAA
Dap-seq
OMalley et al.(2016)
ARF16_col_b
0.856
0.856
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.013G267100.1
B3
111
213
FAKTLTQSDANNGGGFSVPRYCAETIFPALDYSADPPVQTVVAVDVHGQLWKFRHIYRGTPRRHLLTTGWSAFVNRKKLVAGDSVVFLRAENGGIRVGIRRAK
Links
Other
B3
family TFs
Other
Gossypium raimondii
TFs
229 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PEX1_088150
Penicillium expansum
PEX1_088150
N
PITC_074550
Penicillium italicum
PITC_074550
N
PCH_Pc21g06630
Penicillium rubens
PCH_Pc21g06630
N
U727_0043422181
Penicillium solitum
U727_0043422181
N