Lus10041521.g (Linum usitatissimum)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Lus10041521.g T023579_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FUS3
M06706_2.00 		Arabidopsis thaliana
WNHWTGCATGYDHDW
WHDHRCATGCAWDNW		 Dap-seq
OMalley et al.(2016)
FUS3_col_a 		0.847 0.847
FUS3
M09773_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$FUS3_Q2 		0.847 0.847
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10041521 B3 123 225

Links

Other B3 family TFs
Other Linum usitatissimum TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nAv.1.0.1.g09488 Acanthocheilonema viteae nAv.1.0.1.g09488 I
ANCCEY_09967 Ancylostoma ceylanicum ANCCEY_09967 I
ACAC_0000050101 Angiostrongylus cantonensis ACAC_0000050101 I
ACOC_0001070801 Angiostrongylus costaricensis ACOC_0001070801 I
ALUE_0000029801 Ascaris lumbricoides ALUE_0000029801 I
ASU_11663 Ascaris suum ASU_11663 I
Bm2506 Brugia malayi Bm2506 I
BXY_1235100 Bursaphelenchus xylophilus BXY_1235100 I
CBG09659 Caenorhabditis briggsae CBG09659 I
mab-23 Caenorhabditis elegans WBGene00003114 D
CRE12856 Caenorhabditis remanei CRE12856 I
DICVIV_00315 Dictyocaulus viviparus DICVIV_00315 I
GPLIN_000975400 Globodera pallida GPLIN_000975400 I
HPLM_0002064201 Haemonchus placei HPLM_0002064201 I
HPBE_0000855101 Heligmosomoides bakeri HPBE_0000855101 I
maker-nMf.1.1.scaf01464-snap-gene-0.10 Meloidogyne floridensis maker-nMf.1.1.scaf01464-snap-gene-0.10 I
Minc03029 Meloidogyne incognita Minc03029 I
NECAME_10548 Necator americanus NECAME_10548 I
NBR_0001972001 Nippostrongylus brasiliensis NBR_0001972001 I
OESDEN_21377 Oesophagostomum dentatum OESDEN_21377 I
OESDEN_14521 Oesophagostomum dentatum OESDEN_14521 I
PTRK_0001067200 Parastrongyloides trichosuri PTRK_0001067200 I
RSKR_0000942000 Rhabditophanes kr3021 RSKR_0000942000 I
L596_g22821 Steinernema carpocapsae L596_g22821 I
L889_g8599 Steinernema feltiae L889_g8599 I
L893_g14864 Steinernema glaseri L893_g14864 I
L898_g15145 Steinernema monticolum L898_g15145 I
L892_g15684 Steinernema scapterisci L892_g15684 I
SPAL_0001524600 Strongyloides papillosus SPAL_0001524600 I
SSTP_0000299900 Strongyloides stercoralis SSTP_0000299900 I
SVE_0006900 Strongyloides venezuelensis SVE_0006900 I
SMUV_0000842901 Syphacia muris SMUV_0000842901 I
TCNE_0000373201 Toxocara canis TCNE_0000373201 I
WUBG_07178 Wuchereria bancrofti WUBG_07178 I