orange1.1g008078m.g (Citrus sinensis)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 orange1.1g008078m.g T023729_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARF16
M06708_2.00 		Arabidopsis thaliana
TTTACGKTTTTGGCGGRAAAA
TTTTYCCGCCAAAAMCGTAAA		 Dap-seq
OMalley et al.(2016)
ARF16_col_b 		0.701 0.701
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g008078m B3 122 224
orange1.1g008088m B3 122 224

Links

Other B3 family TFs
Other Citrus sinensis TFs

96 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nAv.1.0.1.g09210 Acanthocheilonema viteae nAv.1.0.1.g09210 N 0.000
ANCCAN_17450 Ancylostoma caninum ANCCAN_17450 N 0.000
ANCCAN_17213 Ancylostoma caninum ANCCAN_17213 N 0.000
ANCCEY_13601 Ancylostoma ceylanicum ANCCEY_13601 N 0.000
ACAC_0000097901 Angiostrongylus cantonensis ACAC_0000097901 N 0.000
ACOC_0001046901 Angiostrongylus costaricensis ACOC_0001046901 N 0.000
ASIM_0001667401 Anisakis simplex ASIM_0001667401 N 0.000
Bm2568 Brugia malayi Bm2568 N 0.000
BXY_0200600 Bursaphelenchus xylophilus BXY_0200600 N 0.000
CBG09411 Caenorhabditis briggsae CBG09411 N 0.000
dmd-11 Caenorhabditis elegans WBGene00007930 N 0.000
CRE31028 Caenorhabditis remanei CRE31028 N 0.000
DICVIV_12287 Dictyocaulus viviparus DICVIV_12287 N 0.000
nDi.2.2.2.g11569 Dirofilaria immitis nDi.2.2.2.g11569 N 0.000
DME_0001004101 Dracunculus medinensis DME_0001004101 N 0.000
EEL_0000689801 Elaeophora elaphi EEL_0000689801 N 0.000
EVEC_0001240701 Enterobius vermicularis EVEC_0001240701 N 0.000
GPUH_0000001601 Gongylonema pulchrum GPUH_0000001601 N 0.000
HPLM_0000516101 Haemonchus placei HPLM_0000516101 N 0.000
Hba_18606 Heterorhabditis bacteriophora Hba_18606 N 0.000
LOAG_13016 Loa loa LOAG_13016 N 0.000
OESDEN_21747 Oesophagostomum dentatum OESDEN_21747 N 0.000
OESDEN_10792 Oesophagostomum dentatum OESDEN_10792 N 0.000
OESDEN_06978 Oesophagostomum dentatum OESDEN_06978 N 0.000
OFLC_0001267501 Onchocerca flexuosa OFLC_0001267501 N 0.000
nOo.2.0.1.g06549 Onchocerca ochengi nOo.2.0.1.g06549 N 0.000
WBGene00242644 Onchocerca volvulus WBGene00242644 N 0.000
PEQ_0000726101 Parascaris equorum PEQ_0000726101 N 0.000
PTRK_0001597500 Parastrongyloides trichosuri PTRK_0001597500 N 0.000
scaffold63-EXSNAP2012.11 Pristionchus exspectatus scaffold63-EXSNAP2012.11 N 0.000
PPA09870 Pristionchus pacificus PPA09870 N 0.000
RSKR_0001146100 Rhabditophanes kr3021 RSKR_0001146100 N 0.000
L596_g1000 Steinernema carpocapsae L596_g1000 N 0.000
L889_g10736 Steinernema feltiae L889_g10736 N 0.000
L893_g12635 Steinernema glaseri L893_g12635 N 0.000
L892_g22878 Steinernema scapterisci L892_g22878 N 0.000
SPAL_0001233000 Strongyloides papillosus SPAL_0001233000 N 0.000
SVE_0753100 Strongyloides venezuelensis SVE_0753100 N 0.000
TELCIR_15174 Teladorsagia circumcincta TELCIR_15174 N 0.000
TCLT_0000244001 Thelazia callipaeda TCLT_0000244001 N 0.000
WUBG_05396 Wuchereria bancrofti WUBG_05396 N 0.000