CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Pavir.Ia01270
(
Panicum virgatum
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
Pavir.Ia01270
T023898_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Ia01270.1.p
B3
27
117
FFKVLTGDFRERLGIPDKFVQHIRGKIAKTVKLESRTGCTFDVEVTESLGKVVLQTGWKAFVCAHDLKMWDFLVFKYNGSPRLKVLIFDLS
Pavir.Ia01270.1.p
B3
227
324
CVMKKTSIEGKPQIMDISRKYADVYLPFDHQTLLLQHRGKSWEVRCQIQKSKSNLRSKRLLKGWKQFARDNNLQVGDLCLFELLEDREYTMNVDIIGP
Pavir.Ia01270.2.p
B3
2
23
WDFLVFKYNGSPRLKVLIFDLS
Pavir.Ia01270.2.p
B3
133
230
CVMKKTSIEGKPQIMDISRKYADVYLPFDHQTLLLQHRGKSWEVRCQIQKSKSNLRSKRLLKGWKQFARDNNLQVGDLCLFELLEDREYTMNVDIIGP
Links
Other
B3
family TFs
Other
Panicum virgatum
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CFIO01_07883
Colletotrichum fioriniae
CFIO01_07883
N
PV06_00188
Exophiala oligosperma
PV06_00188
N
PFICI_01303
Pestalotiopsis fici
PFICI_01303
N
Z518_01554
Rhinocladiella mackenziei
Z518_01554
N