LjT15D16.50.nc (Lotus japonicus)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 LjT15D16.50.nc T024446_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAV1
M01646_2.00 		Arabidopsis thaliana
NCACCTGAHN
NDTCAGGTGN		 PBM
Weirauch et al.(2014)
pTH8592 		0.723 0.723
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LjT15D16.50.nc B3 59 164

Links

Other B3 family TFs
Other Lotus japonicus TFs

283 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cagra.11546s0001 Capsella grandiflora Cagra.11546s0001 I 0.723
Carubv10010429m.g Capsella rubella Carubv10010429m.g I 0.723
Eucgr.G02345 Eucalyptus grandis Eucgr.G02345 I 0.700
MLOC_38822 Hordeum vulgare MLOC_38822 I
Lus10034276.g Linum usitatissimum Lus10034276.g I 0.723
mgf023686m Mimulus guttatus mgf023686m I 0.752
OB05G32250 Oryza brachyantha OB05G32250 I 0.703
ORUFI05G26590 Oryza rufipogon ORUFI05G26590 N
Traes_1BL_60A56C455 Triticum aestivum Traes_1BL_60A56C455 I 0.703
Traes_1BL_F14523046 Triticum aestivum Traes_1BL_F14523046 I 0.703
TRIUR3_10778 Triticum urartu TRIUR3_10778 N
TRIUR3_10779 Triticum urartu TRIUR3_10779 I
GRMZM2G018336 Zea mays GRMZM2G018336 I
GRMZM2G065538 Zea mays GRMZM2G065538 I