CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BPC7
(
Arabidopsis lyrata
)
BBR
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF06217 (GAGA_bind)
IPR010409
fgenesh2_kg.4__1574__AT2G35550.4
T024601_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_kg.4__1574__AT2G35550.4
BBR
5
226
PSQNLMLSATNANKGAGLRTSNAHWLHSCIAVPKTTGIDLSQANPAEGVMVPQSHLFPPPTRDSRNDMETVKQKSVNQSPLKSLKPNPPRKKRSASNKSKKTLSIPETKREKKNLDINIDISSFDTSGVPPPVCSCTGVSRVCYKWGMGGWQSSCCTISISTYPLPMSTTRPRVRLAGRKMSNGAYVKLLARLAGEGYNLSHPVDLKNHWARHGTNKFVTIK
Links
Other
BBR
family TFs
Other
Arabidopsis lyrata
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GF11102
Drosophila ananassae
FBgn0088142
N
lola
Drosophila melanogaster
FBgn0005630
D
GI20188
Drosophila mojavensis
FBgn0142924
N
GL17195
Drosophila persimilis
FBgn0154798
N
GA30442
Drosophila pseudoobscura
FBgn0264579
I
GK19011
Drosophila willistoni
FBgn0221009
N