MTR_1g023660 (Medicago truncatula)
BBR

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF06217 (GAGA_bind) IPR010409 MTR_1g023660 T024657_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BPC6
M06719_2.00 		Arabidopsis thaliana
KAGAGAGAGAGAGAGAGAGAG
CTCTCTCTCTCTCTCTCTCTM		 Dap-seq
OMalley et al.(2016)
BPC6_col_a 		0.711 0.711
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AES59638 BBR 1 340

Links

Other BBR family TFs
Other Medicago truncatula TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000002817 Ailuropoda melanoleuca ENSAMEG00000002817 N
ZNF142 Canis familiaris ENSCAFG00000014861 N
ZNF142 Equus caballus ENSECAG00000017751 N
ENSMMUP00000008864 Macaca fascicularis ENSMMUP00000008864 N
ZNF142 Macaca mulatta ENSMMUG00000006737 N
ENSMICG00000005168 Microcebus murinus ENSMICG00000005168 N
Zfp142 Mus musculus ENSMUSG00000026135 N
Myotis_brandtii_ZNF142_10032907 Myotis brandtii Myotis_brandtii_ZNF142_10032907 N
ZNF142 Myotis lucifugus ENSMLUG00000001511 N
ENSNLEG00000008760 Nomascus leucogenys ENSNLEG00000008760 N
ENSPPYG00000013178 Pongo abelii ENSPPYG00000013178 N
Zfp142 Rattus norvegicus ENSRNOG00000022414 N