CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0012s03760
(
Populus trichocarpa
)
BBR
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF06217 (GAGA_bind)
IPR010409
POPTR_0012s03760
T024718_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0012s03760.1
BBR
24
184
HALNNVIVSLFSYSPVQHRYSQANGPEKKRQHPKALKSLKAKKGKRGPQVPKPDGSPSAQRGRSAKKTAEILINGISMDISVFPIPVCSCTGSPQQCYRWGCGGWQSACCTTCISGHPLPISTKRRGTRIEGRKMSYVLANRIDLRTHWAKHGTDKFVTIR
Links
Other
BBR
family TFs
Other
Populus trichocarpa
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
C1orf35
Otolemur garnettii
ENSOGAG00000010978
I
1.000
POPTR_0012s03750
Populus trichocarpa
POPTR_0012s03750
N
0.739
POPTR_0015s05210
Populus trichocarpa
POPTR_0015s05210
N
0.720
RGD1304587
Rattus norvegicus
ENSRNOG00000002944
I
1.000
SapurV1A.0074s0330
Salix purpurea
SapurV1A.0074s0330
N
0.713