Pm006246 (Prunus mume)
BBR

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF06217 (GAGA_bind) IPR010409 Pm006246 T024785_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BPC6
M06719_2.00 		Arabidopsis thaliana
KAGAGAGAGAGAGAGAGAGAG
CTCTCTCTCTCTCTCTCTCTM		 Dap-seq
OMalley et al.(2016)
BPC6_col_a 		0.734 0.734
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm006246 BBR 30 360

Links

Other BBR family TFs
Other Prunus mume TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nAv.1.0.1.g04749 Acanthocheilonema viteae nAv.1.0.1.g04749 I
nAv.1.0.1.g00051 Acanthocheilonema viteae nAv.1.0.1.g00051 N
ACYPI001696 Acyrthosiphon pisum ACYPI001696 I
AAEL002769 Aedes aegypti AAEL002769 N
ANCCAN_23624 Ancylostoma caninum ANCCAN_23624 I
ANCCAN_23625 Ancylostoma caninum ANCCAN_23625 N
ANCCAN_24706 Ancylostoma caninum ANCCAN_24706 I
ANCCEY_02877 Ancylostoma ceylanicum ANCCEY_02877 I
ANCDUO_15205 Ancylostoma duodenale ANCDUO_15205 I
ANCDUO_20174 Ancylostoma duodenale ANCDUO_20174 I
ACOC_0000703501 Angiostrongylus costaricensis ACOC_0000703501 I
ASIM_0001696801 Anisakis simplex ASIM_0001696801 N
AARA009757 Anopheles arabiensis AARA009757 I
AATE019368 Anopheles atroparvus AATE019368 N
ACHR007729 Anopheles christyi ACHR007729 I
ACOM033416 Anopheles coluzzii ACOM033416 N
ACUA003826 Anopheles culicifacies ACUA003826 I
AEPI001687 Anopheles epiroticus AEPI001687 I
AFAF012033 Anopheles farauti AFAF012033 N
AGAP004052 Anopheles gambiae AGAP004052 N
AMEC020934 Anopheles melas AMEC020934 N
AMEM000031 Anopheles merus AMEM000031 N
AMIN002618 Anopheles minimus AMIN002618 I
ASTEI07078 Anopheles stephensi ASTEI07078 I
ASU_00242 Ascaris suum ASU_00242 I
Bm5024 Brugia malayi Bm5024 I
CBN10125 Caenorhabditis brenneri CBN10125 I
CBG22984 Caenorhabditis briggsae CBG22984 I
pros-1 Caenorhabditis elegans WBGene00000448 D
CJA12444 Caenorhabditis japonica CJA12444 I
CRE23850 Caenorhabditis remanei CRE23850 I
Cflo_00868--XP_392355.3_APIME Camponotus floridanus Cflo_00868--XP_392355.3_APIME I
CapteG2449 Capitella teleta CapteG2449 N
CGOC_0000822101 Cylicostephanus goldi CGOC_0000822101 I
DAPPUDRAFT_290533 Daphnia pulex DAPPUDRAFT_290533 I
YQE_10516 Dendroctonus ponderosae YQE_10516 I
DICVIV_00921 Dictyocaulus viviparus DICVIV_00921 I
nDi.2.2.2.g11480 Dirofilaria immitis nDi.2.2.2.g11480 N
DME_0000841401 Dracunculus medinensis DME_0000841401 I
GF16857 Drosophila ananassae FBgn0093877 N
GG18089 Drosophila erecta FBgn0110306 N
GH21437 Drosophila grimshawi FBgn0128899 N
pros Drosophila melanogaster FBgn0004595 N
GI22696 Drosophila mojavensis FBgn0145423 N
GA14403 Drosophila pseudoobscura FBgn0074431 N
GM23939 Drosophila sechellia FBgn0178804 N
pros Drosophila simulans FBgn0025030 N
pros Drosophila virilis FBgn0028753 N
GK11290 Drosophila willistoni FBgn0213301 N
GE26090 Drosophila yakuba FBgn0243130 N
ECPE_0000538001 Echinostoma caproni ECPE_0000538001 N
EVEC_0001110501 Enterobius vermicularis EVEC_0001110501 I
HCOI01824000 Haemonchus contortus HCOI01824000 I
HCOI02128500 Haemonchus contortus HCOI02128500 I
Hba_13682 Heterorhabditis bacteriophora Hba_13682 N
LDEC004085 Leptinotarsa decemlineata LDEC004085 N
nLs.2.1.2.g05095 Litomosoides sigmodontis nLs.2.1.2.g05095 I
LOAG_13494 Loa loa LOAG_13494 N
MCOS_0000195601 Mesocestoides corti MCOS_0000195601 I
NECAME_07738 Necator americanus NECAME_07738 I
nOo.2.0.1.g10265 Onchocerca ochengi nOo.2.0.1.g10265 I
WBGene00244521 Onchocerca volvulus WBGene00244521 I
PTRK_0001568700 Parastrongyloides trichosuri PTRK_0001568700 I
PHUM334550 Pediculus humanus PHUM334550 I
PPAI010076 Phlebotomus papatasi PPAI010076 I
RSKR_0000081800 Rhabditophanes kr3021 RSKR_0000081800 N
SINV18378 Solenopsis invicta SINV18378 I
L596_g9976 Steinernema carpocapsae L596_g9976 I
L889_g22574 Steinernema feltiae L889_g22574 I
L893_g28279 Steinernema glaseri L893_g28279 I
L898_g8569 Steinernema monticolum L898_g8569 I
L892_g25141 Steinernema scapterisci L892_g25141 I
SPAL_0001624500 Strongyloides papillosus SPAL_0001624500 I
SSTP_0000359900 Strongyloides stercoralis SSTP_0000359900 I
SVE_0442300 Strongyloides venezuelensis SVE_0442300 I
SVUK_0000405601 Strongylus vulgaris SVUK_0000405601 I
TELCIR_21732 Teladorsagia circumcincta TELCIR_21732 I
TELCIR_22329 Teladorsagia circumcincta TELCIR_22329 I
TC010596 Tribolium castaneum TC010596 N
D917_07791 Trichinella nativa D917_07791 I
EFV53283 Trichinella spiralis EFV53283 I
TMUE_s0183000500 Trichuris muris TMUE_s0183000500 I
D918_02805 Trichuris suis D918_02805 I
TTRE_0000134301 Trichuris trichiura TTRE_0000134301 I
WUBG_10304 Wuchereria bancrofti WUBG_10304 N