CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Carubv10022023m.g
(
Capsella rubella
)
BBR
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF06217 (GAGA_bind)
IPR010409
Carubv10022023m.g
T024836_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Carubv10022023m
BBR
1
286
MMGEDGLSNRNWGYYEPSQFRPNLGFQLIPSIINRSEKPFVDSPQNQNPNFVTPTNVYRGGGSTSSSLMSFPRDYTVSDAPFMSYSWLNQHRDSKFFSNVPNPSNHHHTGLLVPEASRMTQPMQLLQPEVVGEVDESLKRRQYNVGQRGAPKVKKEKKLKDNNMPRVQRTRSPLLRKSIEMVINGVSMDIGGIPVPVCSCTGMPQQCYRWGCGGWQSACCTTNVSMYPLPMSTKRRGARIAGRKMSQGAFRKVLEKLSTDGFDFSVPIDLKSHWAKHGTNKFVTIR
Links
Other
BBR
family TFs
Other
Capsella rubella
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MLOC_60965
Hordeum vulgare
MLOC_60965
N
0.000
Traes_5BL_B569B5FF4
Triticum aestivum
Traes_5BL_B569B5FF4
N
0.000
Traes_5BS_86C1C9A9F
Triticum aestivum
Traes_5BS_86C1C9A9F
N
0.000
TRIUR3_17083
Triticum urartu
TRIUR3_17083
N
0.000