orange1.1g018368m.g (Citrus sinensis)
BBR

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF06217 (GAGA_bind) IPR010409 orange1.1g018368m.g T024879_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BPC6
M06719_2.00 		Arabidopsis thaliana
KAGAGAGAGAGAGAGAGAGAG
CTCTCTCTCTCTCTCTCTCTM		 Dap-seq
OMalley et al.(2016)
BPC6_col_a 		0.751 0.751
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g018368m BBR 23 357
orange1.1g019800m BBR 1 335
orange1.1g019803m BBR 1 335

Links

Other BBR family TFs
Other Citrus sinensis TFs

37 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CADAFLAG00009617 Aspergillus flavus CADAFLAG00009617 N
ANIA_02644 Aspergillus nidulans CADANIAG00010472 N
A1O1_03543 Capronia coronata A1O1_03543 N
A1O3_07234 Capronia epimyces A1O3_07234 N
U727_00429850121 Penicillium solitum U727_00429850121 N
TSTA_126860 Talaromyces stipitatus TSTA_126860 N