chr4.CM0175.470.nc (Lotus japonicus)
BBR

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF06217 (GAGA_bind) IPR010409 chr4.CM0175.470.nc T024919_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
chr4.CM0175.470.nc BBR 1 317

Links

Other BBR family TFs
Other Lotus japonicus TFs

8 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_04223 Aegilops tauschii F775_04223 I
OBART01G45740 Oryza barthii OBART01G45740 N
OBART09G00850 Oryza barthii OBART09G00850 N
ORGLA01G0394900 Oryza glaberrima ORGLA01G0394900 N
ORGLA09G0007100 Oryza glaberrima ORGLA09G0007100 N
ORGLA09G0007400 Oryza glaberrima ORGLA09G0007400 N
OGLUM01G50090 Oryza glumaepatula OGLUM01G50090 N
OGLUM09G01090 Oryza glumaepatula OGLUM09G01090 N
OGLUM09G01140 Oryza glumaepatula OGLUM09G01140 N
BGIOSGA030217 Oryza indica BGIOSGA030217 N
BGIOSGA005284 Oryza indica BGIOSGA005284 N
BGIOSGA030219 Oryza indica BGIOSGA030219 N
OLONG_027660 Oryza longistaminata OLONG_027660 N
OLONG_018222 Oryza longistaminata OLONG_018222 N
OLONG_000580 Oryza longistaminata OLONG_000580 N
OMERI09G00860 Oryza meridionalis OMERI09G00860 N
OMERI09G00900 Oryza meridionalis OMERI09G00900 N
ONIVA01G52000 Oryza nivara ONIVA01G52000 N
ONIVA09G00960 Oryza nivara ONIVA09G00960 N
ONIVA09G00820 Oryza nivara ONIVA09G00820 N
OPUNC01G44670 Oryza punctata OPUNC01G44670 N
ORUFI01G49230 Oryza rufipogon ORUFI01G49230 N
ORUFI09G00820 Oryza rufipogon ORUFI09G00820 N
ORUFI09G00870 Oryza rufipogon ORUFI09G00870 N
OS01G0975800 Oryza sativa OS01G0975800 N
OS09G0116000 Oryza sativa OS09G0116000 N
OS09G0116800 Oryza sativa OS09G0116800 N
Pavir.Fb00782 Panicum virgatum Pavir.Fb00782 I
TRAES3BF106100060CFD_g Triticum aestivum TRAES3BF106100060CFD_g I