CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

ENSLOCG00000017415 *(Lepisosteus oculatus)* BED ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF02892 (zf-BED)	IPR003656	ENSLOCG00000017415	T026058_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
ZBED1 M02771_2.00	Homo sapiens	HTRTCGCGACATR	YATGTCGCGAYAD	SELEX Jolma et al.(2013) ZBED1_1	0.977	0.977
ZBED1 M04056_2.00	Homo sapiens	VTRTCGCGAYAT	ATRTCGCGAYAB	SELEX Yin et al.(2017) ZBED1_eDBD_HT-SELEX	0.977	0.977
ZBED1 M09776_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$DREF_01	0.977	0.977
ZBED1 M04057_2.00	Homo sapiens	MTRTCGCGAYAK	MTRTCGCGAYAK	SELEX Yin et al.(2017) ZBED1_eDBD_Methyl-HT-SELEX	0.977	0.977
For this family, TFs with SR scores > 0.700* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
ENSLOCP00000021520	BED ZF	23	72	SKVWKYFGFDTDAEGCILHWKKIYCRICMAQIAYSGNTSNLSYHLEKNHP

Links
Other BED ZF family TFs
Other *Lepisosteus oculatus* TFs