POPTR_0003s02610 (Populus trichocarpa)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02892 (zf-BED) IPR003656 POPTR_0003s02610 T027355_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0003s02610.1 BED ZF 39 96

Links

Other BED ZF family TFs
Other Populus trichocarpa TFs

90 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACYPI37104 Acyrthosiphon pisum ACYPI37104 N 0.000
ENSAMEG00000015618 Ailuropoda melanoleuca ENSAMEG00000015618 I 0.000
ENSAMEG00000017891 Ailuropoda melanoleuca ENSAMEG00000017891 I 0.000
ENSAMEG00000019033 Ailuropoda melanoleuca ENSAMEG00000019033 I 0.000
NEUROG1 Anolis carolinensis ENSACAG00000001255 I 0.000
NEUROG2 Anolis carolinensis ENSACAG00000023148 N 0.000
ENSAMXG00000024953 Astyanax mexicanus ENSAMXG00000024953 N 0.000
ENSP00000242462-D1 Bos grunniens ENSP00000242462-D1 I 0.000
ENSP00000317333-D1 Bos grunniens ENSP00000317333-D1 I 0.000
NEUROG1 Bos taurus ENSBTAG00000003331 I 0.000
NEUROG3 Bos taurus ENSBTAG00000006431 I 0.000
NEUROG2 Bos taurus ENSBTAG00000015259 I 0.000
estExt_fgenesh2_kg.C_7600001 Branchiostoma floridae estExt_fgenesh2_kg.C_7600001 I 0.000
estExt_fgenesh2_pg.C_90049 Branchiostoma floridae estExt_fgenesh2_pg.C_90049 I 0.000
NEUROG2 Callithrix jacchus ENSCJAG00000003772 I 0.000
NEUROG1 Callithrix jacchus ENSCJAG00000005899 I 0.000
NEUROG3 Callithrix jacchus ENSCJAG00000016485 I 0.000
Aan_R002107 Calypte anna Aan_R002107 I 0.000
Aan_R011089 Calypte anna Aan_R011089 N 0.000
NEUROG1 Canis familiaris ENSCAFG00000001083 I 0.000
NEUROG3 Canis familiaris ENSCAFG00000023597 I 0.000
NEUROG2 Canis familiaris ENSCAFG00000025325 I 0.000
CapteG70345 Capitella teleta CapteG70345 N 0.000
ENSCPOG00000004662 Cavia porcellus ENSCPOG00000004662 I 0.000
NEUROG1 Cavia porcellus ENSCPOG00000020630 I 0.000
Cmyd_10012142 Chelonia mydas Cmyd_10012142 I 0.000
Cmyd_10017645 Chelonia mydas Cmyd_10017645 I 0.000
ENSCSAG00000000399 Chlorocebus sabaeus ENSCSAG00000000399 I 0.000
ENSCSAG00000000502 Chlorocebus sabaeus ENSCSAG00000000502 I 0.000
ENSCSAG00000018431 Chlorocebus sabaeus ENSCSAG00000018431 I 0.000
NEUROG2 Choloepus hoffmanni ENSCHOG00000000513 I 0.000
NEUROG3 Choloepus hoffmanni ENSCHOG00000004116 I 0.000
neurogenin Ciona intestinalis ENSCING00000004039 N 0.000
ENSCSAVG00000003501 Ciona savignyi ENSCSAVG00000003501 N 0.000
neurog3 Danio rerio ENSDARG00000016951 I 0.000
neurog1 Danio rerio ENSDARG00000056130 N 0.000
NEUROG2 Dasypus novemcinctus ENSDNOG00000010840 I 0.000
NEUROG1 Dasypus novemcinctus ENSDNOG00000018026 I 0.000
DME_0000750701 Dracunculus medinensis DME_0000750701 N 0.000
NEUROG3 Echinops telfairi ENSETEG00000015577 I 0.000
NEUROG2 Felis catus ENSFCAG00000010711 I 0.000
ENSGMOG00000005169 Gadus morhua ENSGMOG00000005169 N 0.000
NEUROG3 Gorilla gorilla ENSGGOG00000002752 I 0.000
NEUROG1 Gorilla gorilla ENSGGOG00000002841 I 0.000
NEUROG2 Gorilla gorilla ENSGGOG00000017054 I 0.000
NEUROG3 Homo sapiens ENSG00000122859 I 0.000
NEUROG2 Homo sapiens ENSG00000178403 D 0.000
NEUROG1 Homo sapiens ENSG00000181965 D 0.000
ENSSTOG00000011758 Ictidomys tridecemlineatus ENSSTOG00000011758 I 0.000
ENSSTOG00000022759 Ictidomys tridecemlineatus ENSSTOG00000022759 I 0.000
ENSSTOG00000026959 Ictidomys tridecemlineatus ENSSTOG00000026959 I 0.000
ISCW020498 Ixodes scapularis ISCW020498 I 0.000
ENSLACG00000002633 Latimeria chalumnae ENSLACG00000002633 I 0.000
ENSLACG00000010446 Latimeria chalumnae ENSLACG00000010446 I 0.000
ENSLACG00000010664 Latimeria chalumnae ENSLACG00000010664 I 0.000
ENSLOCG00000011531 Lepisosteus oculatus ENSLOCG00000011531 I 0.000
ENSLOCG00000011560 Lepisosteus oculatus ENSLOCG00000011560 N 0.000
NEUROG1 Loxodonta africana ENSLAFG00000010799 I 0.000
NEUROG3 Loxodonta africana ENSLAFG00000028187 I 0.000
ENSP00000242462 Macaca fascicularis ENSP00000242462 I 0.000
ENSP00000317580 Macaca fascicularis ENSP00000317580 I 0.000
NEUROG1 Macaca mulatta ENSMMUG00000004770 I 0.000
NEUROG3 Macaca mulatta ENSMMUG00000008956 I 0.000
NEUROG2 Macaca mulatta ENSMMUG00000014078 I 0.000
ENSMEUG00000001133 Macropus eugenii ENSMEUG00000001133 I 0.000
ENSMEUG00000016604 Macropus eugenii ENSMEUG00000016604 I 0.000
NEUROG2 Monodelphis domestica ENSMODG00000005712 I 0.000
NEUROG3 Monodelphis domestica ENSMODG00000012228 I 0.000
ENSMODG00000014458 Monodelphis domestica ENSMODG00000014458 I 0.000
ENSMPUG00000019178 Mustela putorius furo ENSMPUG00000019178 I 0.000
ENSMPUG00000019699 Mustela putorius furo ENSMPUG00000019699 I 0.000
ENSMPUG00000019792 Mustela putorius furo ENSMPUG00000019792 I 0.000
Neurog2 Mus musculus ENSMUSG00000027967 D 0.000
Neurog3 Mus musculus ENSMUSG00000044312 I 0.000
Neurog1 Mus musculus ENSMUSG00000048904 D 0.000
Myotis_brandtii_Cxcl14_10032619 Myotis brandtii Myotis_brandtii_Cxcl14_10032619 I 0.000
NEUROG1 Myotis lucifugus ENSMLUG00000004571 I 0.000
NEUROG3 Myotis lucifugus ENSMLUG00000024120 I 0.000
ENSNLEG00000016424 Nomascus leucogenys ENSNLEG00000016424 I 0.000
ENSNLEG00000018460 Nomascus leucogenys ENSNLEG00000018460 I 0.000
Ogr11668 Ophisaurus gracilis Ogr11668 I 0.000
Ogr17531 Ophisaurus gracilis Ogr17531 I 0.000
ENSONIG00000021289 Oreochromis niloticus ENSONIG00000021289 N 0.000
NEUROG1 Ornithorhynchus anatinus ENSOANG00000003865 I 0.000
NEUROG2 Oryctolagus cuniculus ENSOCUG00000007063 I 0.000
NEUROG3 Oryctolagus cuniculus ENSOCUG00000027045 I 0.000
neurog1 Oryzias latipes ENSORLG00000020531 N 0.000
NEUROG3 Otolemur garnettii ENSOGAG00000005928 I 0.000
NEUROG2 Otolemur garnettii ENSOGAG00000029479 I 0.000
NEUROG1 Otolemur garnettii ENSOGAG00000033152 I 0.000
ENSOARG00000000293 Ovis aries ENSOARG00000000293 I 0.000
ENSOARG00000005615 Ovis aries ENSOARG00000005615 I 0.000
NEUROG3 Pan troglodytes ENSPTRG00000002576 I 0.000
NEUROG2 Pan troglodytes ENSPTRG00000016376 I 0.000
NEUROG1 Pan troglodytes ENSPTRG00000017258 I 0.000
ENSPANG00000003722 Papio anubis ENSPANG00000003722 I 0.000
ENSPANG00000004163 Papio anubis ENSPANG00000004163 I 0.000
ENSPANG00000004407 Papio anubis ENSPANG00000004407 I 0.000
ENSPSIG00000001125 Pelodiscus sinensis ENSPSIG00000001125 I 0.000
ENSPMAG00000006182 Petromyzon marinus ENSPMAG00000006182 I 0.000
ENSPFOG00000019983 Poecilia formosa ENSPFOG00000019983 N 0.000
Pvit_00533 Pogona vitticeps Pvit_00533 I 0.000
ENSPPYG00000002380 Pongo abelii ENSPPYG00000002380 I 0.000
ENSPPYG00000015008 Pongo abelii ENSPPYG00000015008 I 0.000
ENSPPYG00000015801 Pongo abelii ENSPPYG00000015801 I 0.000
Neurog2 Rattus norvegicus ENSRNOG00000010972 I 0.000
Neurog1 Rattus norvegicus ENSRNOG00000022405 I 0.000
Neurog3 Rattus norvegicus ENSRNOG00000024413 I 0.000
ENSSHAG00000002586 Sarcophilus harrisii ENSSHAG00000002586 I 0.000
ENSSHAG00000006703 Sarcophilus harrisii ENSSHAG00000006703 I 0.000
SPU_007147 Strongylocentrotus purpuratus SPU_007147 N 0.000
NEUROG1 Sus scrofa ENSSSCG00000014309 I 0.000
ENSTGUG00000001245 Taeniopygia guttata ENSTGUG00000001245 N 0.000
neurog1 Takifugu rubripes ENSTRUG00000000532 N 0.000
ENSTSYG00000001849 Tarsius syrichta ENSTSYG00000001849 I 0.000
ENSTSYG00000006329 Tarsius syrichta ENSTSYG00000006329 I 0.000
NEUROG3 Tursiops truncatus ENSTTRG00000008216 I 0.000
neurog3.S Xenopus laevis XB-GENE-6055069 I 0.000
neurog1 Xenopus tropicalis XB-GENE-491452 N 0.000
neurog3 Xenopus tropicalis XB-GENE-876279 I 0.000
XP_002935814 Xenopus tropicalis XP_002935814 I 0.000