CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0019s00250
(
Populus trichocarpa
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
POPTR_0019s00250
T027384_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0019s00250.1
BED ZF
23
71
GPFWEHVEDMNGGSMRCKFCGHLFAKDTSISRIKCHLSGMRGRGVKICK
Links
Other
BED ZF
family TFs
Other
Populus trichocarpa
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0019s00450
Populus trichocarpa
POPTR_0019s00450
N
0.762
POPTR_1350s00200
Populus trichocarpa
POPTR_1350s00200
N
0.786
SapurV1A.0436s0160
Salix purpurea
SapurV1A.0436s0160
N
0.714
SapurV1A.0749s0010
Salix purpurea
SapurV1A.0749s0010
N
0.762
SapurV1A.0856s0060
Salix purpurea
SapurV1A.0856s0060
N
0.714
SapurV1A.1585s0040
Salix purpurea
SapurV1A.1585s0040
N
0.762
SapurV1A.1803s0010
Salix purpurea
SapurV1A.1803s0010
N
0.714