POPTR_0019s02130 (Populus trichocarpa)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02892 (zf-BED) IPR003656 POPTR_0019s02130 T027398_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0019s02130.1 BED ZF 30 74

Links

Other BED ZF family TFs
Other Populus trichocarpa TFs

2 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG003929.1 Alligator sinensis Alligator_sinensis_CCG003929.1 N 0.000
Afo_R004241 Aptenodytes forsteri Afo_R004241 N 0.000
ENSAMXG00000007405 Astyanax mexicanus ENSAMXG00000007405 N 0.000
Cmyd_10004934 Chelonia mydas Cmyd_10004934 N 0.000
zgc:171734 Danio rerio ENSDARG00000004864 N 0.000
ENSGMOG00000009491 Gadus morhua ENSGMOG00000009491 N 0.000
ENSGACG00000017356 Gasterosteus aculeatus ENSGACG00000017356 N 0.000
ENSLOCG00000003199 Lepisosteus oculatus ENSLOCG00000003199 N 0.000
Ogr09623 Ophisaurus gracilis Ogr09623 N 0.000
ENSONIG00000006931 Oreochromis niloticus ENSONIG00000006931 N 0.000
zgc:171734 Oryzias latipes ENSORLG00000019674 N 0.000
ENSPSIG00000011857 Pelodiscus sinensis ENSPSIG00000011857 N 0.000
Pvit_19319 Pogona vitticeps Pvit_19319 N 0.000
zgc:171734 Takifugu rubripes ENSTRUG00000014847 N 0.000
zgc:171734 Tetraodon nigroviridis ENSTNIG00000018790 N 0.000
Tal_R001189 Tyto alba Tal_R001189 N 0.000
foxr1.L Xenopus laevis XB-GENE-865022 N 0.000
foxr1 Xenopus tropicalis XB-GENE-484980 N 0.000