POPTR_0031s00260 (Populus trichocarpa)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02892 (zf-BED) IPR003656 POPTR_0031s00260 T027406_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0031s00260.1 BED ZF 13 61

Links

Other BED ZF family TFs
Other Populus trichocarpa TFs

6 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAPLG00000003927 Anas platyrhynchos ENSAPLG00000003927 I
Afo_R013625 Aptenodytes forsteri Afo_R013625 I
ENSAMXG00000008763 Astyanax mexicanus ENSAMXG00000008763 I
ENSAMXG00000020050 Astyanax mexicanus ENSAMXG00000020050 I
fgenesh2_pg.scaffold_104000022 Branchiostoma floridae fgenesh2_pg.scaffold_104000022 N
Brh_R005672 Buceros rhinoceros Brh_R005672 I
Aan_R004293 Calypte anna Aan_R004293 I
mntb Danio rerio ENSDARG00000073988 I
MNT Danio rerio ENSDARG00000101859 I
DAPPUDRAFT_261850 Daphnia pulex DAPPUDRAFT_261850 N
MNT Erinaceus europaeus ENSEEUG00000005745 I
ENSFALG00000004754 Ficedula albicollis ENSFALG00000004754 I
ENSGMOG00000011558 Gadus morhua ENSGMOG00000011558 I
MNT Gallus gallus ENSGALG00000005830 I
MNT Gasterosteus aculeatus ENSGACG00000008790 I
mntb Gasterosteus aculeatus ENSGACG00000020487 I
Gfo_R012737 Geospiza fortis Gfo_R012737 I
ENSLACG00000018117 Latimeria chalumnae ENSLACG00000018117 I
ENSMEUG00000015884 Macropus eugenii ENSMEUG00000015884 I
MNT Meleagris gallopavo ENSMGAG00000008592 I
MNT Monodelphis domestica ENSMODG00000010713 I
Ogr16275 Ophisaurus gracilis Ogr16275 I
ENSONIG00000008133 Oreochromis niloticus ENSONIG00000008133 I
ENSONIG00000008731 Oreochromis niloticus ENSONIG00000008731 I
mntb Oryzias latipes ENSORLG00000002734 I
MNT Oryzias latipes ENSORLG00000007865 I
ENSPSIG00000013581 Pelodiscus sinensis ENSPSIG00000013581 I
ENSPFOG00000015158 Poecilia formosa ENSPFOG00000015158 I
ENSPFOG00000010412 Poecilia formosa ENSPFOG00000010412 I
Pvit_02549 Pogona vitticeps Pvit_02549 I
MNT Taeniopygia guttata ENSTGUG00000008774 I
mntb Takifugu rubripes ENSTRUG00000011273 I
ENSTNIG00000016122 Tetraodon nigroviridis ENSTNIG00000016122 I
mnt.L Xenopus laevis XB-GENE-6087152 I
ENSXMAG00000008629 Xiphophorus maculatus ENSXMAG00000008629 I
ENSXMAG00000011266 Xiphophorus maculatus ENSXMAG00000011266 I