CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0060s00240
(
Populus trichocarpa
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
POPTR_0060s00240
T027411_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0060s00240.1
BED ZF
6
54
DPFWNYIEDRTDGSMKCKFCPHTFANKTSISRIKWHLSGEEGHNVAICH
Links
Other
BED ZF
family TFs
Other
Populus trichocarpa
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HMPREF1541_00717
Cyphellophora europaea
HMPREF1541_00717
N
0.000
HMPREF1120_05631
Exophiala dermatitidis
HMPREF1120_05631
N
0.000
PV06_07948
Exophiala oligosperma
PV06_07948
N
0.000
PV05_06943
Exophiala xenobiotica
PV05_06943
N
0.000
Z518_02054
Rhinocladiella mackenziei
Z518_02054
N
0.000