CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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30106.m000661
(
Ricinus communis
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
30106.m000661
T028055_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
30106.m000661
BED ZF
14
57
DLGWKYCEMIKEGEKVHIKCSYCGKIFKGGGIFRFKEHLAGRKG
30106.m000661
BED ZF
128
176
DMAWKYCQPSKYGDRVQIKCNYCGKVFKGGGIHRFKEHLAGRKGAAPIC
Links
Other
BED ZF
family TFs
Other
Ricinus communis
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMXG00000003942
Astyanax mexicanus
ENSAMXG00000003942
N
ENSGMOG00000003218
Gadus morhua
ENSGMOG00000003218
N
ENSGMOG00000003225
Gadus morhua
ENSGMOG00000003225
N
ENSGMOG00000003232
Gadus morhua
ENSGMOG00000003232
N
ENSGMOG00000003262
Gadus morhua
ENSGMOG00000003262
N
ENSGMOG00000003284
Gadus morhua
ENSGMOG00000003284
N
ENSGACG00000004308
Gasterosteus aculeatus
ENSGACG00000004308
N
ENSGACG00000004312
Gasterosteus aculeatus
ENSGACG00000004312
N
ENSGACG00000004322
Gasterosteus aculeatus
ENSGACG00000004322
N
ENSGACG00000004326
Gasterosteus aculeatus
ENSGACG00000004326
N
ENSGACG00000004327
Gasterosteus aculeatus
ENSGACG00000004327
N
ENSGACG00000004330
Gasterosteus aculeatus
ENSGACG00000004330
N
ENSONIG00000000591
Oreochromis niloticus
ENSONIG00000000591
N
ENSONIG00000000592
Oreochromis niloticus
ENSONIG00000000592
N
ENSPFOG00000017251
Poecilia formosa
ENSPFOG00000017251
N
ENSPFOG00000017255
Poecilia formosa
ENSPFOG00000017255
N
ENSPFOG00000017257
Poecilia formosa
ENSPFOG00000017257
N
ENSPFOG00000022306
Poecilia formosa
ENSPFOG00000022306
N
ENSTRUG00000003571
Takifugu rubripes
ENSTRUG00000003571
N
ENSTNIG00000006238
Tetraodon nigroviridis
ENSTNIG00000006238
N
ENSTNIG00000006239
Tetraodon nigroviridis
ENSTNIG00000006239
N
ENSXMAG00000006187
Xiphophorus maculatus
ENSXMAG00000006187
N
ENSXMAG00000006189
Xiphophorus maculatus
ENSXMAG00000006189
N
ENSXMAG00000006192
Xiphophorus maculatus
ENSXMAG00000006192
N
ENSXMAG00000006198
Xiphophorus maculatus
ENSXMAG00000006198
N