CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gene12006-v1.0-hybrid
(
Fragaria vesca
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
gene12006-v1.0-hybrid
T028284_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mrna12006.1-v1.0-hybrid
BED ZF
110
164
NIAWDHFTLMKNLDGTPLAKPRAKCNHCPQTYGCDTRSNGTSNMKNHLLFNCPKC
Links
Other
BED ZF
family TFs
Other
Fragaria vesca
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HNAJ_0000585901
Hymenolepis nana
HNAJ_0000585901
N
T265_08229
Opisthorchis viverrini
T265_08229
N
PEQ_0001147301
Parascaris equorum
PEQ_0001147301
N
SPER_0002502201
Spirometra erinaceieuropaei
SPER_0002502201
N
TRE_0000313801
Trichobilharzia regenti
TRE_0000313801
N