CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gene13122-v1.0-hybrid
(
Fragaria vesca
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
gene13122-v1.0-hybrid
T028287_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mrna13122.1-v1.0-hybrid
BED ZF
6
49
DTCWEYAEKLDGNKVKCKFCQRVLNGGISRLKHHLSRLPSKGVN
Links
Other
BED ZF
family TFs
Other
Fragaria vesca
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_00491
Aegilops tauschii
F775_00491
N
0.000
MLOC_50426
Hordeum vulgare
MLOC_50426
N
0.000
MLOC_6565
Hordeum vulgare
MLOC_6565
N
0.000
Traes_7AS_B9912B88F
Triticum aestivum
Traes_7AS_B9912B88F
N
0.000
TRIUR3_07297
Triticum urartu
TRIUR3_07297
N
0.000
TRIUR3_08238
Triticum urartu
TRIUR3_08238
N
0.000