CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Pavir.Ab01384
(
Panicum virgatum
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
Pavir.Ab01384
T028433_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Ab01384.1.p
BED ZF
26
74
DVGWEYGVLVDANNKDKVRCNLCNKEMRGGIYRLKQHLAHEGKNVTKCP
Pavir.Ab01384.2.p
BED ZF
26
74
DVGWEYGVLVDANNKDKVRCNLCNKEMRGGIYRLKQHLAHEGKNVTKCP
Links
Other
BED ZF
family TFs
Other
Panicum virgatum
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
XP_002154190.1
Hydra magnipapillata
XP_002154190.1
N
XP_002154597.1
Hydra magnipapillata
XP_002154597.1
N
XP_002156521.1
Hydra magnipapillata
XP_002156521.1
N
XP_002157989.1
Hydra magnipapillata
XP_002157989.1
N
XP_002162636.1
Hydra magnipapillata
XP_002162636.1
N
XP_002162660.1
Hydra magnipapillata
XP_002162660.1
N
XP_002163598.1
Hydra magnipapillata
XP_002163598.1
N
XP_002165668.1
Hydra magnipapillata
XP_002165668.1
N
XP_002166056.1
Hydra magnipapillata
XP_002166056.1
N
XP_002166538.1
Hydra magnipapillata
XP_002166538.1
N
XP_002167072.1
Hydra magnipapillata
XP_002167072.1
N
XP_002167685.1
Hydra magnipapillata
XP_002167685.1
N
XP_002167688.1
Hydra magnipapillata
XP_002167688.1
N
XP_002170503.1
Hydra magnipapillata
XP_002170503.1
N
XP_002170627.1
Hydra magnipapillata
XP_002170627.1
N
XP_002170962.1
Hydra magnipapillata
XP_002170962.1
N