CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Cb01025
(
Panicum virgatum
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
Pavir.Cb01025
T028446_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Cb01025.1.p
BED ZF
26
74
DVGWEYGVLIDAQNKDKVKCKFCGHQSTGGVYRLKQHVANVGKNVKKCR
Links
Other
BED ZF
family TFs
Other
Panicum virgatum
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
FFUJ_04794
Fusarium fujikuroi
FFUJ_04794
N
FGRRES_17259
Fusarium graminearum
FGRRES_17259
N
FOXG_08358
Fusarium oxysporum
FOXG_08358
N
NechaG33281
Fusarium solani
NechaG33281
N
FVEG_06315
Fusarium verticillioides
FVEG_06315
N
MYCTH_37566
Myceliophthora thermophila
MYCTH_37566
N
e_gw1.18.1110.1
Nectria haematococca
e_gw1.18.1110.1
N