Pavir.Cb01644 (Panicum virgatum)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 Pavir.Cb01644 T028447_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Cb01644.1.p BED ZF 27 73

Links

Other BED ZF family TFs
Other Panicum virgatum TFs

11 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bcin13g03660 Botrytis cinerea Bcin13g03660 N
GLRG_11249 Colletotrichum graminicola GLRG_11249 N
CSUB01_00741 Colletotrichum sublineola CSUB01_00741 N
GGTG_06715 Gaeumannomyces graminis GGTG_06715 N
M7I_7844 Glarea lozoyensis M7I_7844 N
MGG_01130 Magnaporthe oryzae MGG_01130 N
MBM_06419 Marssonina brunnea MBM_06419 N
X797_000815 Metarhizium robertsii X797_000815 N
OIDMADRAFT_123417 Oidiodendron maius OIDMADRAFT_123417 N
SS1G_02497 Sclerotinia sclerotiorum SS1G_02497 N
S40288_09128 Stachybotrys chartarum S40288_09128 N
S40285_03706 Stachybotrys chlorohalonata S40285_03706 N
UV8b_6560 Ustilaginoidea virens UV8b_6560 N
VDBG_07807 Verticillium albo atrum VDBG_07807 N
VDBG_07807 Verticillium alfalfae VDBG_07807 N
VDAG_09672 Verticillium dahliae VDAG_09672 N