Pavir.Ia00683 (Panicum virgatum)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 Pavir.Ia00683 T028514_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ia00683.1.p BED ZF 113 164

Links

Other BED ZF family TFs
Other Panicum virgatum TFs

97 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACRE_042220 Acremonium chrysogenum ACRE_042220 N 0.000
BBA_00369 Beauveria bassiana BBA_00369 N 0.000
Bcin11g04140 Botrytis cinerea Bcin11g04140 N 0.000
CHGG_01593 Chaetomium globosum CHGG_01593 N 0.000
CFIO01_11527 Colletotrichum fioriniae CFIO01_11527 N 0.000
CGGC5_2543 Colletotrichum gloeosporioides CGGC5_2543 N 0.000
GLRG_01428 Colletotrichum graminicola GLRG_01428 N 0.000
Cob_12394 Colletotrichum orbiculare Cob_12394 N 0.000
CSUB01_00331 Colletotrichum sublineola CSUB01_00331 N 0.000
UCREL1_6164 Eutypa lata UCREL1_6164 N 0.000
NechaG74715 Fusarium solani NechaG74715 N 0.000
GGTG_06036 Gaeumannomyces graminis GGTG_06036 N 0.000
CMQ_233 Grosmannia clavigera CMQ_233 N 0.000
MGG_09312 Magnaporthe oryzae MGG_09312 N 0.000
MAPG_04289 Magnaporthe poae MAPG_04289 N 0.000
MAC_05326 Metarhizium acridum MAC_05326 N 0.000
MBR_03526 Metarhizium brunneum MBR_03526 N 0.000
MGU_04956 Metarhizium guizhouense MGU_04956 N 0.000
MAJ_00581 Metarhizium majus MAJ_00581 N 0.000
X797_003832 Metarhizium robertsii X797_003832 N 0.000
MYCTH_2294789 Myceliophthora thermophila MYCTH_2294789 N 0.000
fgenesh1_pg.sca_1_chr1_3_0000326 Nectria haematococca fgenesh1_pg.sca_1_chr1_3_0000326 N 0.000
ada-4 Neurospora crassa NCU03320 N 0.000
estExt_fgenesh2_pg.C_70219 Neurospora discreta estExt_fgenesh2_pg.C_70219 N 0.000
OIDMADRAFT_28114 Oidiodendron maius OIDMADRAFT_28114 N 0.000
F503_03263 Ophiostoma piceae uamh F503_03263 N 0.000
PFICI_00905 Pestalotiopsis fici PFICI_00905 N 0.000
PODANS_1_9670 Podospora anserina PODANS_1_9670 N 0.000
SPBR_03626 Sporothrix brasiliensis SPBR_03626 N 0.000
HMPREF1624_08577 Sporothrix schenckii HMPREF1624_08577 N 0.000
S40288_09651 Stachybotrys chartarum S40288_09651 N 0.000
S40285_01923 Stachybotrys chlorohalonata S40285_01923 N 0.000
VHEMI04002 Torrubiella hemipterigena VHEMI04002 N 0.000
TRIREDRAFT_104513 Trichoderma reesei TRIREDRAFT_104513 N 0.000
TRIVIDRAFT_42652 Trichoderma virens TRIVIDRAFT_42652 N 0.000
VDBG_04567 Verticillium albo atrum VDBG_04567 N 0.000
VDBG_04567 Verticillium alfalfae VDBG_04567 N 0.000