Pavir.J21810 (Panicum virgatum)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 Pavir.J21810 T028602_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J21810.1.p BED ZF 29 77
Pavir.J21810.2.p BED ZF 29 77

Links

Other BED ZF family TFs
Other Panicum virgatum TFs

6 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL008346 Aedes aegypti AAEL008346 N
AAEL008350 Aedes aegypti AAEL008350 N
AALB006841 Anopheles albimanus AALB006841 N
AARA002562 Anopheles arabiensis AARA002562 N
AATE017083 Anopheles atroparvus AATE017083 N
ACUA018382 Anopheles culicifacies ACUA018382 N
ADIR000927 Anopheles dirus ADIR000927 N
AEPI000454 Anopheles epiroticus AEPI000454 N
AFAF016022 Anopheles farauti AFAF016022 N
AFUN011482 Anopheles funestus AFUN011482 N
AGAP000876 Anopheles gambiae AGAP000876 N
AMAM014999 Anopheles maculatus AMAM014999 N
AMEC019303 Anopheles melas AMEC019303 N
AMIN005829 Anopheles minimus AMIN005829 N
AQUA002447 Anopheles quadriannulatus AQUA002447 N
ASTEI01188 Anopheles stephensi ASTEI01188 N
BGIBMGA001001 Bombyx mori BGIBMGA001001 N
CpipJ_CPIJ018670 Culex pipiens CpipJ_CPIJ018670 N
CPIJ018670 Culex quinquefasciatus CPIJ018670 N
KGM_17269 Danaus plexippus KGM_17269 N
YQE_00101 Dendroctonus ponderosae YQE_00101 I
GF21451 Drosophila ananassae FBgn0098452 I
GH24341 Drosophila grimshawi FBgn0131797 I
GI10999 Drosophila mojavensis FBgn0133762 I
GL20379 Drosophila persimilis FBgn0157974 I
GA17723 Drosophila pseudoobscura FBgn0077733 I
GJ15597 Drosophila virilis FBgn0202787 I
GK25271 Drosophila willistoni FBgn0227230 I
HHAL003290-PA Halyomorpha halys HHAL003290-PA I
HMEL006591 Heliconius melpomene HMEL006591 N
LDEC003645 Leptinotarsa decemlineata LDEC003645 I
LCUP011237 Lucilia cuprina LCUP011237 I
MDOA005556 Musca domestica MDOA005556 I