CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.J27029
(
Panicum virgatum
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
Pavir.J27029
T028618_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J27029.1.p
BED ZF
78
135
SKVWKDFDKIYEVIDGKERRTGARCKHCKKNLTGRSTHGTGHLKRHIPICPVLKGRNA
Links
Other
BED ZF
family TFs
Other
Panicum virgatum
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANCCAN_26563
Ancylostoma caninum
ANCCAN_26563
N
ANCCEY_04384
Ancylostoma ceylanicum
ANCCEY_04384
N
ACAC_0000806701
Angiostrongylus cantonensis
ACAC_0000806701
N
ACOC_0000838801
Angiostrongylus costaricensis
ACOC_0000838801
N
DICVIV_04927
Dictyocaulus viviparus
DICVIV_04927
N
HCOI00411200
Haemonchus contortus
HCOI00411200
N