CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GPUH_0002484801
(
Gongylonema pulchrum
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
GPUH_0002484801
T029356_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GPUH_0002484801-mRNA-1
BED ZF
6
51
SKVWLFCERIDEDGESKAKCKICGMVMLRKLGSTRAMLRHLRKMHE
Links
Other
BED ZF
family TFs
Other
Gongylonema pulchrum
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
nAv.1.0.1.g00532
Acanthocheilonema viteae
nAv.1.0.1.g00532
N
0.886
Bm8673
Brugia malayi
Bm8673
N
0.886
BTMF_0001472701
Brugia timori
BTMF_0001472701
N
0.886
nDi.2.2.2.g07613
Dirofilaria immitis
nDi.2.2.2.g07613
N
0.886
EEL_0000375001
Elaeophora elaphi
EEL_0000375001
N
0.886
GPUH_0001195501
Gongylonema pulchrum
GPUH_0001195501
N
1.000
nLs.2.1.2.g03172
Litomosoides sigmodontis
nLs.2.1.2.g03172
N
0.886
LOAG_08756
Loa loa
LOAG_08756
N
0.886
nOo.2.0.1.g06652
Onchocerca ochengi
nOo.2.0.1.g06652
N
0.886
WBGene00245968
Onchocerca volvulus
WBGene00245968
N
0.886
TCLT_0000311201
Thelazia callipaeda
TCLT_0000311201
N
0.886